| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hldE
Identifier: 197117256
GI number: 197117256
Start: 1019676
End: 1021139
Strand: Direct
Name: hldE
Synonym: Gbem_0864
Alternate gene names: 197117256
Gene position: 1019676-1021139 (Clockwise)
Preceding gene: 308535199
Following gene: 197117257
Centisome position: 22.09
GC content: 65.51
Gene sequence:
>1464_bases GTGGAACGTAGGGAAGTAGAATCCTTTTTCGAGCGGGCCACTTCGATCCGGGCCCTCGTTGTCGGCGACCTGATGCTGGA CGAGTACCTCTGGGGACGGGCGGAACGGATCTCGCCGGAGGCCCCGGTGCAGGTGGTGGAGGTGGCCAGAGAAGACCTCC GTCTCGGCGGCGCCGGCAACGTGGTGAATAACCTCGCCGCCCTGGGATGCCAGGTCAGCGTCTGCTCGGTGATTGGTAGC GACGAGAACGGAGCGCTCCTGCGCCGCGCCCTGGAGGAGAAAGGGGCGGGACTGGAAGGGCTTTTCGAGGAAGGCGAGAG AAGGACCAGCAAGAAGACGCGCGTGCTCGCGGCGAACCAGCAGATCGTCAGGATCGACCGGGAGACCAAGTCGTCCATAG CAGCCGCCAGCGAGCAGGGGATTATCGACTACCTTGCCGCCCGAAGCGGCGACTTCGACGTGATCGTGGTCTCGGATTAC CTGAAAGGGGTCCTGACCCCGGCGGTCCTTTCGGCGGTCTGCCGCAGCGGCAGGGAACTGGGGATCCCGGTGGTGGTCGA CCCCAAGGGAAACGACTACGGCAAGTACCGCGGCGCCACCATACTGACCCCGAACCGCAAGGAGGCGGAAATTGCCTCGG GGGTAGCCATCACGGACCAGGAATCGCTGCAGTGCGCAGCGAGCGGGCTTTTGTCCTGCCTGGAGCTGGACGCGCTTCTC ATCACGCGCAGCGAGGCCGGGATGTCGCTCTTCCCGGCGGCCGGGGGGGCGGTTCATATCCCGACCGTGGCCCGCGAGGT GTTCGACGTGACCGGCGCCGGGGACACCGTGATCTCGGTCCTTTCGCTGGGGCTTGCCTGCGGCCTCACCATGGCTGACG CAGCCTGGATCGCCAACGTGGCGGCGGGGATCGCGGTCGGCAAACTCGGTACCTCGACGGTCGCCCCGCAGGAGATCGTC GCGGAGGTGGGGCACGGTGCTAAGGACAGCGACTCCAAGATCAAGAACCTGGACGTCCTGGCGCACGCCATAGCCCGCGA GCACTCCCGCGGCAAGAAGGTGGTCTTTACCAACGGCTGCTTCGACCTTCTGCACGTCGGGCACGTGAAGTACCTGCAAA AGGCGAGGGGGCTCGGGGACATCCTGGTGGTGGGGCTAAATACAGACGCCTCGGTCCGCCGCCTCAAGGGGGAGAAGCGC CCCCTCATCGAGGAGACGGAGCGGGCCCACATCCTGGCGGCGTTGGACTGCATCGACTACGTGGTGCTCTTCGACGAGGA CACCCCCTTGAAGGTAATCGAGACGCTTGGGCCGGACATCCTGGTGAAAGGCGGCGACTACAGCATCGAAGGGGTGGTCG GGCGCGAGGTGGTGGAGGCCCGCGGGGGACGCGTGGAGTTGATCCAGTTCGTCGACGGCAGGTCCACGAGCCGCATCATC GAGAAGATCCTTTCCTCGTATTGA
Upstream 100 bases:
>100_bases TTTTCAGGACGAAGTCAGATAGTAAGACAGATATGACCTTTAGCCTTAGCCGTCTGTCGAACATTGAACGTTGAACCTTG AACGGGTTTCTGGAGGTTTT
Downstream 100 bases:
>100_bases GAGTGGGGGGAGGGGGATAGAAGCGATGGATAAAGACGCGAAAATCTACGTCGCCGGCCACCGCGGCCTGGTCGGCTCCG CCCTGGTGCGGGAGCTCGCT
Product: bifunctional D-glycero-D-mannoheptose-7-phosphate kinase/D-glycero-D-mannoheptose-1-phosphate adenylyltransferase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MERREVESFFERATSIRALVVGDLMLDEYLWGRAERISPEAPVQVVEVAREDLRLGGAGNVVNNLAALGCQVSVCSVIGS DENGALLRRALEEKGAGLEGLFEEGERRTSKKTRVLAANQQIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDY LKGVLTPAVLSAVCRSGRELGIPVVVDPKGNDYGKYRGATILTPNRKEAEIASGVAITDQESLQCAASGLLSCLELDALL ITRSEAGMSLFPAAGGAVHIPTVAREVFDVTGAGDTVISVLSLGLACGLTMADAAWIANVAAGIAVGKLGTSTVAPQEIV AEVGHGAKDSDSKIKNLDVLAHAIAREHSRGKKVVFTNGCFDLLHVGHVKYLQKARGLGDILVVGLNTDASVRRLKGEKR PLIEETERAHILAALDCIDYVVLFDEDTPLKVIETLGPDILVKGGDYSIEGVVGREVVEARGGRVELIQFVDGRSTSRII EKILSSY
Sequences:
>Translated_487_residues MERREVESFFERATSIRALVVGDLMLDEYLWGRAERISPEAPVQVVEVAREDLRLGGAGNVVNNLAALGCQVSVCSVIGS DENGALLRRALEEKGAGLEGLFEEGERRTSKKTRVLAANQQIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDY LKGVLTPAVLSAVCRSGRELGIPVVVDPKGNDYGKYRGATILTPNRKEAEIASGVAITDQESLQCAASGLLSCLELDALL ITRSEAGMSLFPAAGGAVHIPTVAREVFDVTGAGDTVISVLSLGLACGLTMADAAWIANVAAGIAVGKLGTSTVAPQEIV AEVGHGAKDSDSKIKNLDVLAHAIAREHSRGKKVVFTNGCFDLLHVGHVKYLQKARGLGDILVVGLNTDASVRRLKGEKR PLIEETERAHILAALDCIDYVVLFDEDTPLKVIETLGPDILVKGGDYSIEGVVGREVVEARGGRVELIQFVDGRSTSRII EKILSSY >Mature_487_residues MERREVESFFERATSIRALVVGDLMLDEYLWGRAERISPEAPVQVVEVAREDLRLGGAGNVVNNLAALGCQVSVCSVIGS DENGALLRRALEEKGAGLEGLFEEGERRTSKKTRVLAANQQIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDY LKGVLTPAVLSAVCRSGRELGIPVVVDPKGNDYGKYRGATILTPNRKEAEIASGVAITDQESLQCAASGLLSCLELDALL ITRSEAGMSLFPAAGGAVHIPTVAREVFDVTGAGDTVISVLSLGLACGLTMADAAWIANVAAGIAVGKLGTSTVAPQEIV AEVGHGAKDSDSKIKNLDVLAHAIAREHSRGKKVVFTNGCFDLLHVGHVKYLQKARGLGDILVVGLNTDASVRRLKGEKR PLIEETERAHILAALDCIDYVVLFDEDTPLKVIETLGPDILVKGGDYSIEGVVGREVVEARGGRVELIQFVDGRSTSRII EKILSSY
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family
Homologues:
Organism=Homo sapiens, GI4505651, Length=133, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI296841136, Length=133, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789432, Length=474, Percent_Identity=44.5147679324894, Blast_Score=366, Evalue=1e-102, Organism=Drosophila melanogaster, GI19921220, Length=143, Percent_Identity=34.965034965035, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI45550973, Length=143, Percent_Identity=34.965034965035, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550974, Length=143, Percent_Identity=34.965034965035, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550975, Length=143, Percent_Identity=34.965034965035, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HLDE_GEOBB (B5EEZ1)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002137683.1 - ProteinModelPortal: B5EEZ1 - SMR: B5EEZ1 - GeneID: 6783702 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_0864 - HOGENOM: HBG545535 - OMA: LTPNRKE - ProtClustDB: CLSK828725 - HAMAP: MF_01603 - InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR02198 - TIGRFAMs: TIGR02199
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB
EC number: 2.7.-.-
Molecular weight: Translated: 51837; Mature: 51837
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00583 PFKB_KINASES_1; PS00584 PFKB_KINASES_2
Important sites: ACT_SITE 275-275
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERREVESFFERATSIRALVVGDLMLDEYLWGRAERISPEAPVQVVEVAREDLRLGGAGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCCH VVNNLAALGCQVSVCSVIGSDENGALLRRALEEKGAGLEGLFEEGERRTSKKTRVLAANQ HHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCC QIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDYLKGVLTPAVLSAVCRSGREL EEEEECCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC GIPVVVDPKGNDYGKYRGATILTPNRKEAEIASGVAITDQESLQCAASGLLSCLELDALL CCEEEECCCCCCCCCCCCEEEECCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHE ITRSEAGMSLFPAAGGAVHIPTVAREVFDVTGAGDTVISVLSLGLACGLTMADAAWIANV EEECCCCCEEECCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH AAGIAVGKLGTSTVAPQEIVAEVGHGAKDSDSKIKNLDVLAHAIAREHSRGKKVVFTNGC HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC FDLLHVGHVKYLQKARGLGDILVVGLNTDASVRRLKGEKRPLIEETERAHILAALDCIDY HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCE VVLFDEDTPLKVIETLGPDILVKGGDYSIEGVVGREVVEARGGRVELIQFVDGRSTSRII EEEECCCCCHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCEEEEEEEECCCCHHHHH EKILSSY HHHHHCC >Mature Secondary Structure MERREVESFFERATSIRALVVGDLMLDEYLWGRAERISPEAPVQVVEVAREDLRLGGAGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCCH VVNNLAALGCQVSVCSVIGSDENGALLRRALEEKGAGLEGLFEEGERRTSKKTRVLAANQ HHHHHHHHCCCEEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCC QIVRIDRETKSSIAAASEQGIIDYLAARSGDFDVIVVSDYLKGVLTPAVLSAVCRSGREL EEEEECCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC GIPVVVDPKGNDYGKYRGATILTPNRKEAEIASGVAITDQESLQCAASGLLSCLELDALL CCEEEECCCCCCCCCCCCEEEECCCCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHE ITRSEAGMSLFPAAGGAVHIPTVAREVFDVTGAGDTVISVLSLGLACGLTMADAAWIANV EEECCCCCEEECCCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH AAGIAVGKLGTSTVAPQEIVAEVGHGAKDSDSKIKNLDVLAHAIAREHSRGKKVVFTNGC HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC FDLLHVGHVKYLQKARGLGDILVVGLNTDASVRRLKGEKRPLIEETERAHILAALDCIDY HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCE VVLFDEDTPLKVIETLGPDILVKGGDYSIEGVVGREVVEARGGRVELIQFVDGRSTSRII EEEECCCCCHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCEEEEEEEECCCCHHHHH EKILSSY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA