Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 308535199

Identifier: 308535199

GI number: 308535199

Start: 1019112

End: 1019477

Strand: Direct

Name: 308535199

Synonym: NA

Alternate gene names: NA

Gene position: 1019112-1019477 (Clockwise)

Preceding gene: 197117254

Following gene: 197117256

Centisome position: 22.08

GC content: 48.09

Gene sequence:

>366_bases
GTGAAAATTGAGCGCTTTGAGGATGTTGACTCTTGGAAAGAAGCTCGTTTGTTGGTGAGTGAGGTATATAAACTACTCGA
TAATTGCAGGGATTATGGGTTTAAAGACCAGATCCAGCGTGCCACGGTTTCGGTCATGTCGAACATTGCAGAAGGTTTCG
ACCGAGGCAGCAACAGGGAGTTCGTGCAGTACCTTATAGTCTCTCGCGGTTCCCTCTCCGAGGTGAAAAGCCTGACCTAT
GCAGCTCTCGACATCGGATATTTCGATCATGCCGCCTTTGAGGCGGTAATCGCGCGTTGTAACAAGATCAGCAACATCTT
AAACGGGTTCATAAGGTTCCTGAAGGCATCGGAACGTAAGGCATAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: hypothetical protein

Products: NA

Alternate protein names: 23S Ribosomal RNA Protein; 23S Ribosomal Protein; Glutamine-Scyllo-Inositol Transaminase; S23 Ribosomal; 30S Ribosomal Protein S

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:
NA

Sequences:

>Translated_121_residues
MKIERFEDVDSWKEARLLVSEVYKLLDNCRDYGFKDQIQRATVSVMSNIAEGFDRGSNREFVQYLIVSRGSLSEVKSLTY
AALDIGYFDHAAFEAVIARCNKISNILNGFIRFLKASERKA
>Mature_121_residues
MKIERFEDVDSWKEARLLVSEVYKLLDNCRDYGFKDQIQRATVSVMSNIAEGFDRGSNREFVQYLIVSRGSLSEVKSLTY
AALDIGYFDHAAFEAVIARCNKISNILNGFIRFLKASERKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13869; Mature: 13869

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIERFEDVDSWKEARLLVSEVYKLLDNCRDYGFKDQIQRATVSVMSNIAEGFDRGSNRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
FVQYLIVSRGSLSEVKSLTYAALDIGYFDHAAFEAVIARCNKISNILNGFIRFLKASERK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MKIERFEDVDSWKEARLLVSEVYKLLDNCRDYGFKDQIQRATVSVMSNIAEGFDRGSNRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
FVQYLIVSRGSLSEVKSLTYAALDIGYFDHAAFEAVIARCNKISNILNGFIRFLKASERK
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA