Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116684

Identifier: 197116684

GI number: 197116684

Start: 342849

End: 344585

Strand: Direct

Name: 197116684

Synonym: Gbem_0284

Alternate gene names: NA

Gene position: 342849-344585 (Clockwise)

Preceding gene: 197116683

Following gene: 197116686

Centisome position: 7.43

GC content: 64.42

Gene sequence:

>1737_bases
ATGGAGGTTGGAGGTAACTCCGCGCACCTGCCGGTGCGAGGCCGCAAAGAACCGCTGGTGCGACGCATGAGGATGAGAGA
GCTGTCAAACCCCGAATCCGACCGTCGAAGCATCCTGCGATGGGGAGGCCTCGCCGCGTCCCTTGCCCTTTTTCTCGTGG
CGCTTCTGGCCCCGGCGCGCCCGGCCTCCTCGTCCTATCTGGAGTTGCCTCCAATACCTGCCGCATCCGCGCCTCAAACC
GCAGCACCCTCCCCACCTGCCGCATCCGCTTCCCAAGCCGCAGCGTCGCCCGCGCCTGCCGACGCCGTCGGATTCCAACT
CGCCCCCGCGCCGCGGGACGCTGAAACCGCACGTTTTCGCAGCCAGTTCCGCGCCGAGTACCCCATCGAGCCTTGGACCG
CGCTCGGCGACCTTACGCCCTCGTTCGTCCTGCAACAGGGGGAGTACGGCGGCCGCGGCTACGCCGTCCTTGCCGAGATG
GGGGACATCCGCATCAAGCAGACTCCCAACACCCTTAACGAAGCCGCCGGTCGCGGCGGTCGTTTCGCCCTTCTTACCGG
CAACTCAGGCAACACCGCGAAACTGGAGACCTTCGCCGCCTCCGGCCAGCACGGCGCCACACACGACGACCTGTTGGTGG
GTGCGACGGGAGAACTCTCTCTCATGGGGGATAGCGCCCGGTTCAAGACCATCCTTTTGAGCGGCCGCAGGTCCCTGTAC
AGCGAGGGGCGCTGGCCGTCCGGCGCGGAAAAGGGTGACGTGCTGGGGCTGGTCGCCGCCGTCGATCCCTTCGGCGGCAG
GCTCGCAGCCGAGGCGGAAATCGACTACTCGAGCTACGACGGCGACACGACTGACGAGACCGCGGCCACGCGCGACTCCG
CCCGTCGGCTCAAAGTAGGGGGAGGATGGGGCGCCAGCCGCTACAGCGCCCTCTATGAGCGAACCGGCCCGCGCTATCGC
CTCCTCACCGGCTGCGGCCCTGAGAGGGACACGGAGGGGGTAAGCCTCGGGTTCGGACACGCCTTCGAGCTCCATTCCTT
CGACGTCAAGCTCTCCCGTTACAACGACAACACGGAAAAGAACGACCTGTCGCCAAGGCTCTACCGGTACGAGGGGCTGG
TGGACTACCACTTCAAGGTGTTCAGCAAGCTGCAGCTTTCGCTGCAATACAAGAAGAGATTCGTCGACAGCACCAAGGAA
CCTTTGGGGTATCTCCCCAAGGAGGTGGAAGAGGATGCGGTCTCTGGGCAGCTTAACTACCTGACGGGAAGATGGGATCT
GGGGCTTAGGGGTGGGGTGTCGCAAAGGACCGACAAGCTGCACCGGCAAAGGGAGTCGAGCACCGAGAGCATCGGCTTCC
TTACCAAATTCAGCGCGGCAGGCGTGACCGTTTTGCCGGATCTCTCCCTGAAGCGGGTCACGGATTACAGTTCCAGCCAG
CGCACCGACCAGTATGCGGTGAACCTGGGGCTGAACGGGACCCTGTTGGAAAAGCGGCTCGACTACGAGGTGAAGGGGGG
GTACAAGCAGGAGCGAACCGGCGTCCCCGGGACCGGGAAACAGGTGGTGGGAGCCAAGGTGAGGGCGGCCTATCCGCTGG
CGCGGCTTTTCAAGTGGTTTCATCCCCCTTCACTGGGGGTGAAGGGGGAGTTCAAGGAGATCAACGACCGCGGCGCCGAC
AGCAGGGAGAGCGATTTCTCCCTGCTGATCTCGCTGGACGGCGGAAACTTCTTGTAA

Upstream 100 bases:

>100_bases
CAATCCGTACATATACAGGCCTTACCTGCAGCACCTGCAACAGCGGCGAGCACCCGAACGGGAGCCCGCCGCACTCAATT
TCCCCCCCCCGGGGGATGCA

Downstream 100 bases:

>100_bases
AAGCAGATTAAGAGTGAAACAGATTAAGATTAAGAGAAAGCGGCAGACAAAGGCCTTTAGTCTTGATCTCAATCTTAATC
TTAATCTGTTTTATCTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT
AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM
GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY
SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR
LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE
PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ
RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD
SRESDFSLLISLDGGNFL

Sequences:

>Translated_578_residues
MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT
AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM
GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY
SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR
LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE
PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ
RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD
SRESDFSLLISLDGGNFL
>Mature_578_residues
MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT
AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM
GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY
SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR
LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE
PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ
RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD
SRESDFSLLISLDGGNFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62713; Mature: 62713

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PASSSYLELPPIPAASAPQTAAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFR
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCEEECCCCCCHHHHHHH
SQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEMGDIRIKQTPNTLNEAAGRGG
HHHCCCCCCCCHHHHHCCCHHHHEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCC
RFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY
EEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCHHHH
SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVG
HCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEC
GGWGASRYSALYERTGPRYRLLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEK
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCCC
NDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKEPLGYLPKEVEEDAVSGQLNY
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCEEEE
LTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ
EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEECCCCHHHHHCCCCCC
RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWF
CCCEEEEEECCCCHHHHHHCCEEECCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
HPPSLGVKGEFKEINDRGADSRESDFSLLISLDGGNFL
CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PASSSYLELPPIPAASAPQTAAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFR
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCEEECCCCCCHHHHHHH
SQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEMGDIRIKQTPNTLNEAAGRGG
HHHCCCCCCCCHHHHHCCCHHHHEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCC
RFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY
EEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCHHHH
SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVG
HCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEC
GGWGASRYSALYERTGPRYRLLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEK
CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCCC
NDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKEPLGYLPKEVEEDAVSGQLNY
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCEEEE
LTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ
EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEECCCCHHHHHCCCCCC
RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWF
CCCEEEEEECCCCHHHHHHCCEEECCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
HPPSLGVKGEFKEINDRGADSRESDFSLLISLDGGNFL
CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA