Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116678

Identifier: 197116678

GI number: 197116678

Start: 336572

End: 337024

Strand: Direct

Name: 197116678

Synonym: Gbem_0278

Alternate gene names: NA

Gene position: 336572-337024 (Clockwise)

Preceding gene: 197116677

Following gene: 197116679

Centisome position: 7.29

GC content: 58.5

Gene sequence:

>453_bases
ATGGTCGTAGGTTTCAACCATAACATCAGGTACAAAGGGGAATTGTTCCACGTCCAGACCGAGGACAGCGGCATAGCAAA
CCCCCATATCATCACCCTTCTTTACCGGGGCGGAACCATCCTTGCCTCGGCGAAAACGAGCTACGCCGACATCATCAAGA
CCGAACAGCTTGAGCTGGTGGTCGAATCGATCATGAAAGAGCAGCACAAGGAGATGATGCGGCGCCTTAAAAACGGGGAG
TTCGACGCCAGGATCTTCCCGGACGGGGCTCCGGCCTGCGCGGAGGAACCCGCCGCCAAGGAGCCGCCCCCCGAAAAGCA
GAGCCCTCCGGCAGAACAGGCGCCCAAGCAACAGTCCGCGCCCGCAGCCAAAGTCATACCCCCGGCACAATCAGCCAACC
GTAGCCTGGACGAGGTGATCCTCGATTACCTCATCACGGGCGAAGACAAATAA

Upstream 100 bases:

>100_bases
CGGCAACCCGGCTGGGGGAGCGCCCTAATATCGCTTGCAACGATCCTTCTGCTGTGCTAACTTGCGGTCGGGTTCCGCCA
TTTGGCGTAGAGGTAACACG

Downstream 100 bases:

>100_bases
AGCCAGCCTGAAAGGAACCTTCGTGAAAGAAAAGATTGCAGATCTGGAGGAAAAGGCGAGGCGCCTGCGCGTCGCCATCG
TGAAGACGCTGCACAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVVGFNHNIRYKGELFHVQTEDSGIANPHIITLLYRGGTILASAKTSYADIIKTEQLELVVESIMKEQHKEMMRRLKNGE
FDARIFPDGAPACAEEPAAKEPPPEKQSPPAEQAPKQQSAPAAKVIPPAQSANRSLDEVILDYLITGEDK

Sequences:

>Translated_150_residues
MVVGFNHNIRYKGELFHVQTEDSGIANPHIITLLYRGGTILASAKTSYADIIKTEQLELVVESIMKEQHKEMMRRLKNGE
FDARIFPDGAPACAEEPAAKEPPPEKQSPPAEQAPKQQSAPAAKVIPPAQSANRSLDEVILDYLITGEDK
>Mature_150_residues
MVVGFNHNIRYKGELFHVQTEDSGIANPHIITLLYRGGTILASAKTSYADIIKTEQLELVVESIMKEQHKEMMRRLKNGE
FDARIFPDGAPACAEEPAAKEPPPEKQSPPAEQAPKQQSAPAAKVIPPAQSANRSLDEVILDYLITGEDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16535; Mature: 16535

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGFNHNIRYKGELFHVQTEDSGIANPHIITLLYRGGTILASAKTSYADIIKTEQLELV
CEECCCCCEEECCEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHH
VESIMKEQHKEMMRRLKNGEFDARIFPDGAPACAEEPAAKEPPPEKQSPPAEQAPKQQSA
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PAAKVIPPAQSANRSLDEVILDYLITGEDK
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVVGFNHNIRYKGELFHVQTEDSGIANPHIITLLYRGGTILASAKTSYADIIKTEQLELV
CEECCCCCEEECCEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHH
VESIMKEQHKEMMRRLKNGEFDARIFPDGAPACAEEPAAKEPPPEKQSPPAEQAPKQQSA
HHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PAAKVIPPAQSANRSLDEVILDYLITGEDK
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA