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The map label for this gene is mcp039 [H]

Identifier: 197116629

GI number: 197116629

Start: 270490

End: 272913

Strand: Reverse

Name: mcp039 [H]

Synonym: Gbem_0229

Alternate gene names: 197116629

Gene position: 272913-270490 (Counterclockwise)

Preceding gene: 197116640

Following gene: 197116628

Centisome position: 5.91

GC content: 59.24

Gene sequence:

>2424_bases
GTGACTATAAAAGCAAAACTGATTTTGAACTCATGCATAGTACTGGTTGCTGTCGGCGCAGTTTCCGTCAGCAGTTTCTT
CAGCATGACCTCGATCAAGGGAAAACTTTCCTACCTCACCGAGAAGAGCACCCCCTACCAGGTCAGAACCGTCGAATTCC
AACGCGCACTTCAGGGTGCGACCGCGGACCTGATTAAGGTGGGCGCGGCACATGACGATCTAGCATATGCCGCGGCCAAA
AAAGAGGCGGAGAAATCGCTGGAGGAGGTCCAAAAGACCCTGGAGCGGCTGGAGAAAATCTCGGGGGAGAAACTCGAAGC
GTCGGCGGAATTGAACGGCGTCGCTCAGGAGCTTTTCTCCACCATGGCTGCGAAGCTTAAATCGGAAAAGGAATCCGGCG
AGGCCCGTGCGGTCATCGTACAGAAGGCCCAGGAAGCCAATGGCAAGATCCGGGAGCTGGAGAACAAGGTCCGATCGCTG
CAGCAGTCGAGTTCCGCCGCCTACTCAAGCGCCAACGAGGATGCCGACAAGTTGTCGAAGAAGCTCGCCAGCATCGAAAC
CCTGAAGGTATCCCTGAAGGATCTGCAGTTCATCTTCTACGATATACTCCGCACGCCCGAAAAGAAGGCTTTACACGACC
GTTTCGCGGGGACGCTGACCAGGATCCAGCAAAACGGCAACATTAAGAATAACAAGGCGCTAGGATCAGGATTCGCCGAT
TTCCTGATTAAGGCCAACACGGCTATCAAGGCACGTACAGAGGGGGCGGACCCGCGCCAGGTCGACGCCCTCATGAAGGA
GCCAAACGCCGCGCTTTCAGAGATGTGGGACTTGATCGAGGACGAAGTCGACAAATCCCAGCTCCAGGTCAGCAAACTCT
CCGCCCGGCTTCCGGGCTACGTCACCAAAGCAAACGCCGCCGTTAACGTCCTCTCCACCAACACCGAGATCGTCTCCTTA
GGCAAGTCCCTTGAATCCCTTTCCAGCCGGCTGTTCCTCGCTACCAGCGAAAAGGAGCTCGACGCCATTGCCGCCGACTT
CGGCCAGCAATACCAGAAGCTTGCCGTGGCGGAAAGGTCGGTGGAGACACTTATAAAAACGGCAGGTACTGCACGGGAAA
CAAGGATACTAAGGGAGGCTTCAGTCTCCCTGGCGGGGATCAGGGACACCGTCTTCATGCGCAACGGCATTCTGGAGAAG
CTGCACCAGAAGATGCAACTTGAGGCGAAGGCGGATAGCGCCGCTATCAAGCTGCGCGATATCGTCTCGAAACAGGCGGA
AAAAGGAAAGAAAACCGTGTCGGTGGCCCAGGAAGGGCAGGAAGTTGCCATAGGCACGGTCAACCGGACCATCCGCTACA
GCATGATGCTTATCATCCTCATTGCCATCGGCTCCGCAGTGATCGGGACCCTGGTGGGGATGTGGATCTACCGCAGCATC
ACAGGGCCGATCGAGCACCTCATCACGGTCGCCGAAGAGGTCGCCGAAGGCAATCTTGCCGTGGATCTGGCAGCCACACG
AAACGACGAGGTGGGACATGTGCAAAATGCCATGTCGAGGATGCTGGTGAGCATCAGGAACGTGGTCAAAAGTATCGGAG
AGGCCACCGACACCCTTGCCGGCAGCTCGGTAGAGATGGCAGCCACAGCTGGCGCGCTGGAGACCGGCGCGGAACGCCAG
GCCAGCAGGGTGGACGGATCCGCCGCCACCATGGCCCAGATGAACCAGACCACGATGGACATGGCTAAGAACACCGCCGA
CACAGCCAACGCCGCCGACACGATGAAGGCGATTGCCGCGGAGGGGAAAGGTGCGATGCAGCTTACGGCCGACGAGTTGC
AGGCCTTCGCCCAGAGCTTCACCGAGACCGCAGTTATGGTCGAGGAACTGGGCGGCCAATCGGCGCAGATCAGCGAGATC
GGCACCCTCATCAGGGACATCGCCGACCAGACGAACCTGCTGGCGCTTAATGCCGCCATCGAGGCCGCACGCGCCGGCGA
GCAGGGACGAGGATTCGCCGTCGTCGCCGACAGCGTGAGGGAACTTGCGGAAAGGACAGCCACCGCCACCGCCGAGATCA
CCCAGACGGTGAAGAACATGCAGGTGAGCGTCGGGCGGTCGGTCGCCAAGATGAGCGAAGAACGGGAGGCGGTGGGGACC
ATATTGACACGCGTCAACACGACCGTCGGGGCCATTGAGCGGATCGCACAGTACGTGGATCAGGTTAACGATATGGTGCG
AAGGATCGCCACCGCCACCGAAGAACAGTCTGCCGCAAGCAGCGAAGTTTCTGAGAACGTCGAGGAGATCGCCCTGCTGA
CGCGCGAGGTCCGCGCCTCGTGCAGCGGCATCAGGGAATCCTCCGACGGGCTCTCCCGGCTTGCCGGCGATCTCCATGGC
ATGGTCGCCTGGTTCAAGGTGTAG

Upstream 100 bases:

>100_bases
ACATCTGTTTCCTCTCAAGAAACCGACGATTGCCACCGATAACCGTACAATGCGCGTGGAAATAGACAGGTGCAATCCCA
CGCTCAAAAGGAGCCTTTAC

Downstream 100 bases:

>100_bases
CAGTGGAAGTTTCGCAATTTTGCGAAATCAGGCCCGATTCGGCCTGATCCGTCGAACTAGCTAACTTACCGCCTTTTTCG
CCTATCCCCGCGCAAGAGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 807; Mature: 806

Protein sequence:

>807_residues
MTIKAKLILNSCIVLVAVGAVSVSSFFSMTSIKGKLSYLTEKSTPYQVRTVEFQRALQGATADLIKVGAAHDDLAYAAAK
KEAEKSLEEVQKTLERLEKISGEKLEASAELNGVAQELFSTMAAKLKSEKESGEARAVIVQKAQEANGKIRELENKVRSL
QQSSSAAYSSANEDADKLSKKLASIETLKVSLKDLQFIFYDILRTPEKKALHDRFAGTLTRIQQNGNIKNNKALGSGFAD
FLIKANTAIKARTEGADPRQVDALMKEPNAALSEMWDLIEDEVDKSQLQVSKLSARLPGYVTKANAAVNVLSTNTEIVSL
GKSLESLSSRLFLATSEKELDAIAADFGQQYQKLAVAERSVETLIKTAGTARETRILREASVSLAGIRDTVFMRNGILEK
LHQKMQLEAKADSAAIKLRDIVSKQAEKGKKTVSVAQEGQEVAIGTVNRTIRYSMMLIILIAIGSAVIGTLVGMWIYRSI
TGPIEHLITVAEEVAEGNLAVDLAATRNDEVGHVQNAMSRMLVSIRNVVKSIGEATDTLAGSSVEMAATAGALETGAERQ
ASRVDGSAATMAQMNQTTMDMAKNTADTANAADTMKAIAAEGKGAMQLTADELQAFAQSFTETAVMVEELGGQSAQISEI
GTLIRDIADQTNLLALNAAIEAARAGEQGRGFAVVADSVRELAERTATATAEITQTVKNMQVSVGRSVAKMSEEREAVGT
ILTRVNTTVGAIERIAQYVDQVNDMVRRIATATEEQSAASSEVSENVEEIALLTREVRASCSGIRESSDGLSRLAGDLHG
MVAWFKV

Sequences:

>Translated_807_residues
MTIKAKLILNSCIVLVAVGAVSVSSFFSMTSIKGKLSYLTEKSTPYQVRTVEFQRALQGATADLIKVGAAHDDLAYAAAK
KEAEKSLEEVQKTLERLEKISGEKLEASAELNGVAQELFSTMAAKLKSEKESGEARAVIVQKAQEANGKIRELENKVRSL
QQSSSAAYSSANEDADKLSKKLASIETLKVSLKDLQFIFYDILRTPEKKALHDRFAGTLTRIQQNGNIKNNKALGSGFAD
FLIKANTAIKARTEGADPRQVDALMKEPNAALSEMWDLIEDEVDKSQLQVSKLSARLPGYVTKANAAVNVLSTNTEIVSL
GKSLESLSSRLFLATSEKELDAIAADFGQQYQKLAVAERSVETLIKTAGTARETRILREASVSLAGIRDTVFMRNGILEK
LHQKMQLEAKADSAAIKLRDIVSKQAEKGKKTVSVAQEGQEVAIGTVNRTIRYSMMLIILIAIGSAVIGTLVGMWIYRSI
TGPIEHLITVAEEVAEGNLAVDLAATRNDEVGHVQNAMSRMLVSIRNVVKSIGEATDTLAGSSVEMAATAGALETGAERQ
ASRVDGSAATMAQMNQTTMDMAKNTADTANAADTMKAIAAEGKGAMQLTADELQAFAQSFTETAVMVEELGGQSAQISEI
GTLIRDIADQTNLLALNAAIEAARAGEQGRGFAVVADSVRELAERTATATAEITQTVKNMQVSVGRSVAKMSEEREAVGT
ILTRVNTTVGAIERIAQYVDQVNDMVRRIATATEEQSAASSEVSENVEEIALLTREVRASCSGIRESSDGLSRLAGDLHG
MVAWFKV
>Mature_806_residues
TIKAKLILNSCIVLVAVGAVSVSSFFSMTSIKGKLSYLTEKSTPYQVRTVEFQRALQGATADLIKVGAAHDDLAYAAAKK
EAEKSLEEVQKTLERLEKISGEKLEASAELNGVAQELFSTMAAKLKSEKESGEARAVIVQKAQEANGKIRELENKVRSLQ
QSSSAAYSSANEDADKLSKKLASIETLKVSLKDLQFIFYDILRTPEKKALHDRFAGTLTRIQQNGNIKNNKALGSGFADF
LIKANTAIKARTEGADPRQVDALMKEPNAALSEMWDLIEDEVDKSQLQVSKLSARLPGYVTKANAAVNVLSTNTEIVSLG
KSLESLSSRLFLATSEKELDAIAADFGQQYQKLAVAERSVETLIKTAGTARETRILREASVSLAGIRDTVFMRNGILEKL
HQKMQLEAKADSAAIKLRDIVSKQAEKGKKTVSVAQEGQEVAIGTVNRTIRYSMMLIILIAIGSAVIGTLVGMWIYRSIT
GPIEHLITVAEEVAEGNLAVDLAATRNDEVGHVQNAMSRMLVSIRNVVKSIGEATDTLAGSSVEMAATAGALETGAERQA
SRVDGSAATMAQMNQTTMDMAKNTADTANAADTMKAIAAEGKGAMQLTADELQAFAQSFTETAVMVEELGGQSAQISEIG
TLIRDIADQTNLLALNAAIEAARAGEQGRGFAVVADSVRELAERTATATAEITQTVKNMQVSVGRSVAKMSEEREAVGTI
LTRVNTTVGAIERIAQYVDQVNDMVRRIATATEEQSAASSEVSENVEEIALLTREVRASCSGIRESSDGLSRLAGDLHGM
VAWFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=33.2236842105263, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=387, Percent_Identity=28.9405684754522, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=30.3680981595092, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1787690, Length=313, Percent_Identity=31.629392971246, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789453, Length=304, Percent_Identity=31.9078947368421, Blast_Score=103, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 86583; Mature: 86451

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKAKLILNSCIVLVAVGAVSVSSFFSMTSIKGKLSYLTEKSTPYQVRTVEFQRALQGA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC
TADLIKVGAAHDDLAYAAAKKEAEKSLEEVQKTLERLEKISGEKLEASAELNGVAQELFS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TMAAKLKSEKESGEARAVIVQKAQEANGKIRELENKVRSLQQSSSAAYSSANEDADKLSK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLASIETLKVSLKDLQFIFYDILRTPEKKALHDRFAGTLTRIQQNGNIKNNKALGSGFAD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FLIKANTAIKARTEGADPRQVDALMKEPNAALSEMWDLIEDEVDKSQLQVSKLSARLPGY
HHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTKANAAVNVLSTNTEIVSLGKSLESLSSRLFLATSEKELDAIAADFGQQYQKLAVAERS
EEECCCEEEEEECCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
VETLIKTAGTARETRILREASVSLAGIRDTVFMRNGILEKLHQKMQLEAKADSAAIKLRD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVSKQAEKGKKTVSVAQEGQEVAIGTVNRTIRYSMMLIILIAIGSAVIGTLVGMWIYRSI
HHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGPIEHLITVAEEVAEGNLAVDLAATRNDEVGHVQNAMSRMLVSIRNVVKSIGEATDTLA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSSVEMAATAGALETGAERQASRVDGSAATMAQMNQTTMDMAKNTADTANAADTMKAIAA
CCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EGKGAMQLTADELQAFAQSFTETAVMVEELGGQSAQISEIGTLIRDIADQTNLLALNAAI
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHH
EAARAGEQGRGFAVVADSVRELAERTATATAEITQTVKNMQVSVGRSVAKMSEEREAVGT
HHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTRVNTTVGAIERIAQYVDQVNDMVRRIATATEEQSAASSEVSENVEEIALLTREVRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGIRESSDGLSRLAGDLHGMVAWFKV
HHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIKAKLILNSCIVLVAVGAVSVSSFFSMTSIKGKLSYLTEKSTPYQVRTVEFQRALQGA
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCC
TADLIKVGAAHDDLAYAAAKKEAEKSLEEVQKTLERLEKISGEKLEASAELNGVAQELFS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TMAAKLKSEKESGEARAVIVQKAQEANGKIRELENKVRSLQQSSSAAYSSANEDADKLSK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLASIETLKVSLKDLQFIFYDILRTPEKKALHDRFAGTLTRIQQNGNIKNNKALGSGFAD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FLIKANTAIKARTEGADPRQVDALMKEPNAALSEMWDLIEDEVDKSQLQVSKLSARLPGY
HHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTKANAAVNVLSTNTEIVSLGKSLESLSSRLFLATSEKELDAIAADFGQQYQKLAVAERS
EEECCCEEEEEECCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
VETLIKTAGTARETRILREASVSLAGIRDTVFMRNGILEKLHQKMQLEAKADSAAIKLRD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVSKQAEKGKKTVSVAQEGQEVAIGTVNRTIRYSMMLIILIAIGSAVIGTLVGMWIYRSI
HHHHHHHCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGPIEHLITVAEEVAEGNLAVDLAATRNDEVGHVQNAMSRMLVSIRNVVKSIGEATDTLA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSSVEMAATAGALETGAERQASRVDGSAATMAQMNQTTMDMAKNTADTANAADTMKAIAA
CCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EGKGAMQLTADELQAFAQSFTETAVMVEELGGQSAQISEIGTLIRDIADQTNLLALNAAI
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHHHH
EAARAGEQGRGFAVVADSVRELAERTATATAEITQTVKNMQVSVGRSVAKMSEEREAVGT
HHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTRVNTTVGAIERIAQYVDQVNDMVRRIATATEEQSAASSEVSENVEEIALLTREVRAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSGIRESSDGLSRLAGDLHGMVAWFKV
HHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]