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The map label for this gene is yaaH [H]

Identifier: 197116628

GI number: 197116628

Start: 269569

End: 270198

Strand: Reverse

Name: yaaH [H]

Synonym: Gbem_0228

Alternate gene names: 197116628

Gene position: 270198-269569 (Counterclockwise)

Preceding gene: 197116629

Following gene: 197116625

Centisome position: 5.85

GC content: 57.46

Gene sequence:

>630_bases
ATGAGTGATCTGAAATTGGGAAATCCTGCAGTAGTCGGCCTCGCCGGCTTCGGAATGACAACATTCGTGCTGCAATGCCA
CAACCTGGGATGGTGCGGTATCGCCCCCGTCCTCTGGCTCGGGCTCTGCTTCGGCGGCACCGCCCAGCTCGTCGCCGGTT
TGATGGAGATGAGGACCGGTAACAACTTCGGTTTCTGCGCCTTTACCGGTTATGGAGCCTTCTGGATTTCCCTTTGCCTG
ATGATCATCTTCGGGAAGAACCCGACCCTGGTCGCCTCCTACCCGACCCTGGCCTTCAACGCCAACGATCTCGGGTTCTA
CCTGGTGGCCTGGACCATCTTCACCTTCATCCTCTTCATCGCCTCCATGAAGCATAATGCGACATTGGCCTTCATCTTCC
TCACCCTGCTGCTTGGCTTCATCGGTCTCGATGTCAAAGAATTTACCGGCAGCGCCCTTGCCGGGACCTTCGCAGCTTAC
GACCTGCTGATCTGTGCATTCTCGGCACTTTACCTGATGGCTGTTGCCGTATATGCCGAATCCGGCATCAACCTTCCCGT
CGGCGAGGCATGGATCAAGGACAAGCCCCAGACCGAGGAGGCCGTTGCCACCAGCAAGGTCACCGCATAG

Upstream 100 bases:

>100_bases
AATACACAAAAGTATAACATTGGTATGTTCATTGCTTCCCGTTAAGCTGGCAGCGAATCCACATATCGCGAAGCAAAATT
TGAACAATAGGGAGGATGTA

Downstream 100 bases:

>100_bases
ATATCCCTCTGCCAAGGCGGGCGCAACGCGCCGAGCAGGCAGACAAAACGATAAAGAGAGAAGGGCCATGGCAACCGCAT
GGCCCTTTTTCTTTGGCGTG

Product: YaaH-like membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSDLKLGNPAVVGLAGFGMTTFVLQCHNLGWCGIAPVLWLGLCFGGTAQLVAGLMEMRTGNNFGFCAFTGYGAFWISLCL
MIIFGKNPTLVASYPTLAFNANDLGFYLVAWTIFTFILFIASMKHNATLAFIFLTLLLGFIGLDVKEFTGSALAGTFAAY
DLLICAFSALYLMAVAVYAESGINLPVGEAWIKDKPQTEEAVATSKVTA

Sequences:

>Translated_209_residues
MSDLKLGNPAVVGLAGFGMTTFVLQCHNLGWCGIAPVLWLGLCFGGTAQLVAGLMEMRTGNNFGFCAFTGYGAFWISLCL
MIIFGKNPTLVASYPTLAFNANDLGFYLVAWTIFTFILFIASMKHNATLAFIFLTLLLGFIGLDVKEFTGSALAGTFAAY
DLLICAFSALYLMAVAVYAESGINLPVGEAWIKDKPQTEEAVATSKVTA
>Mature_208_residues
SDLKLGNPAVVGLAGFGMTTFVLQCHNLGWCGIAPVLWLGLCFGGTAQLVAGLMEMRTGNNFGFCAFTGYGAFWISLCLM
IIFGKNPTLVASYPTLAFNANDLGFYLVAWTIFTFILFIASMKHNATLAFIFLTLLLGFIGLDVKEFTGSALAGTFAAYD
LLICAFSALYLMAVAVYAESGINLPVGEAWIKDKPQTEEAVATSKVTA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=193, Percent_Identity=39.8963730569948, Blast_Score=118, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324329, Length=153, Percent_Identity=37.2549019607843, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6319855, Length=126, Percent_Identity=40.4761904761905, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320592, Length=123, Percent_Identity=31.7073170731707, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 22351; Mature: 22219

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLKLGNPAVVGLAGFGMTTFVLQCHNLGWCGIAPVLWLGLCFGGTAQLVAGLMEMRTG
CCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
NNFGFCAFTGYGAFWISLCLMIIFGKNPTLVASYPTLAFNANDLGFYLVAWTIFTFILFI
CCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHH
ASMKHNATLAFIFLTLLLGFIGLDVKEFTGSALAGTFAAYDLLICAFSALYLMAVAVYAE
HHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGINLPVGEAWIKDKPQTEEAVATSKVTA
CCCCCCCCHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SDLKLGNPAVVGLAGFGMTTFVLQCHNLGWCGIAPVLWLGLCFGGTAQLVAGLMEMRTG
CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
NNFGFCAFTGYGAFWISLCLMIIFGKNPTLVASYPTLAFNANDLGFYLVAWTIFTFILFI
CCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHH
ASMKHNATLAFIFLTLLLGFIGLDVKEFTGSALAGTFAAYDLLICAFSALYLMAVAVYAE
HHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGINLPVGEAWIKDKPQTEEAVATSKVTA
CCCCCCCCHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]