Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116567

Identifier: 197116567

GI number: 197116567

Start: 197130

End: 197471

Strand: Reverse

Name: 197116567

Synonym: Gbem_0167

Alternate gene names: NA

Gene position: 197471-197130 (Counterclockwise)

Preceding gene: 197116568

Following gene: 197116566

Centisome position: 4.28

GC content: 45.91

Gene sequence:

>342_bases
ATGGATCCAAATCTTGTCACCGGTCATATCATTGATGCCGCCATGAAGGTTCATACTGCCTTGGGTCCTGGACTTCTGGA
AAGTGCATACGAGGCGTGTTTACTGTACGAATTGCACAAAAGAAAAATGGCTGCATCTTCACAAATTATTCTGCCAGTAC
GGTACGACGGTTTGAAAATAGACGTAGGCTACCGGATGGATCTCCTTGTCGAGAACAAAGTGGTGGTCGAACTGAAGTCG
GTTGATTTCCTACAACCCATTCATACAGCACAATTGCTGACGTACCTGAAATTGAGTGGGAAGGACCTGGGCTGCTTATT
AACTTCAATGTCCCTCACCTGA

Upstream 100 bases:

>100_bases
CAGCCCCGTGCTGGAACTGTTTAAAGGGCCGATCGCGTTGCTGGTCAAGTAAAGGCACTCACCACAGAGGAACACAGAGG
AACCACAGAGGAAAAACCTC

Downstream 100 bases:

>100_bases
AGGATGGAATTCAACGTTTTGTGCTTTAGGTTTTCCTCTGTGTACCTCTGTGGTGAGTGCTTTTGTTTCTGGAGAACCAA
GATGATCATCCCTGACCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDPNLVTGHIIDAAMKVHTALGPGLLESAYEACLLYELHKRKMAASSQIILPVRYDGLKIDVGYRMDLLVENKVVVELKS
VDFLQPIHTAQLLTYLKLSGKDLGCLLTSMSLT

Sequences:

>Translated_113_residues
MDPNLVTGHIIDAAMKVHTALGPGLLESAYEACLLYELHKRKMAASSQIILPVRYDGLKIDVGYRMDLLVENKVVVELKS
VDFLQPIHTAQLLTYLKLSGKDLGCLLTSMSLT
>Mature_113_residues
MDPNLVTGHIIDAAMKVHTALGPGLLESAYEACLLYELHKRKMAASSQIILPVRYDGLKIDVGYRMDLLVENKVVVELKS
VDFLQPIHTAQLLTYLKLSGKDLGCLLTSMSLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12470; Mature: 12470

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPNLVTGHIIDAAMKVHTALGPGLLESAYEACLLYELHKRKMAASSQIILPVRYDGLKI
CCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE
DVGYRMDLLVENKVVVELKSVDFLQPIHTAQLLTYLKLSGKDLGCLLTSMSLT
ECCCEEEEEECCEEEEEECCCCHHCHHHHHHHHHHHHCCCCCHHEEEEEECCC
>Mature Secondary Structure
MDPNLVTGHIIDAAMKVHTALGPGLLESAYEACLLYELHKRKMAASSQIILPVRYDGLKI
CCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEE
DVGYRMDLLVENKVVVELKSVDFLQPIHTAQLLTYLKLSGKDLGCLLTSMSLT
ECCCEEEEEECCEEEEEECCCCHHCHHHHHHHHHHHHCCCCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA