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The map label for this gene is 197116558

Identifier: 197116558

GI number: 197116558

Start: 187556

End: 190042

Strand: Direct

Name: 197116558

Synonym: Gbem_0158

Alternate gene names: NA

Gene position: 187556-190042 (Clockwise)

Preceding gene: 197116556

Following gene: 197116559

Centisome position: 4.06

GC content: 62.4

Gene sequence:

>2487_bases
TTGAGCAATAACATACTTTTGTCAGTGGAAAAGCCCGCCCGTTACATGGGCGGGGAGATGGGAACGGTTTCCGGCAGGGA
GGGGGCGCTCGAGTTCGTGCTCGCTTTCCCTGACGTTTATGAAATTGGGATGAGCCACCTGGGGCTGCAGGTCCTTTACG
GAGTGCTGAAAGAGGTCCCCTGGATCATGCCGGAGCGCGCCTATGCGCCTTGGCCGGACCTCGAGGAGTCGCTCAGGACC
CAGGGGAAGCCGCTGGTGACGCTGGAGCGCAGCCTGCCTCTGATCGAGGCGGACGTAGTGGGTTTCACGCTGCAGTACGA
ACTCTCCTACACCAACATATTGAACATGCTTGATCTGTCTGGAATTCCGCTGCTTGCCTCGGAGCGGAACGAGGGTTATC
CCCTGATCCTGGGGGGCGGTCCCTGCGCCTACAACCCGGAGCCCTTGGCCGACTTCTTCGACGCCTTTCTGATCGGGGAC
GGCGAGGACGCGATAGTAGAGATCGCCGACTGCGTTCGCCAGTGGAAAGAGGAGAAGCTGCCGAAGAGCGTGCTTCTTGA
GCAGCTTGCCCGCATCCAAGGGGTTTACGTCCCTTGCTTCTTCGAGGTGAGCTATCGTCCCGACGGCGCGGTCGAAAAGA
TAGCGCCGCTTCTGGCGGGGTATGGGAGCGTGAAACGGCGCTTCGTGGCCGACCTTGAAAGCGCTTACTACCCGACCTCA
CCGGTGGTTCCCTTCCTGAAGACCGTACACGACAGGGTGAGCGTCGAGATTTCCCGAGGCTGCACACGAGGTTGCCGGTT
CTGCCAGGCAGGTTACATTTACCGCCCGGTGCGTGAGCGAAGCCCCGAGCGGGTGCTGGAGATCGTCGAGGAGACCCTGG
GCAACACCGGGTACGACGAGGTATCTCTTTTGTCGCTTTCCACAGGCGATTACGGCTGCTTGACTCCGCTCTTGAAGGGG
CTCATGGACCGTTACGCCTCCCAGAAAAAGGCGGTTTCACTCCCTTCCATGCGGGTGGGGAGCCTCAGCCCCGAGATGGC
CGAGGAGATCCGCCGGGTGCGCAAGACCGGTTTCACCCTGGCGCCCGAAGCGGGAAGCGAGCGGCTCAGAAGGGTGATCA
ACAAGGGGATCACCGAGGAGGCGCTCCTGGAGAACGCCCGCGCCGTCTACAGCAACGGCTGGCGTCTCATCAAGCTCTAC
TTCATGATCGGCCTTCCCACCGAGACCATGGAAGACCTGGACCGCATCGTGGAGATCTCCCGCGAGGTGAAGCGTCAGGG
GAAATTCGCCGGCAACGGCGGCGACGTCAACGTCTCGGTCTCCAGCTTTGTGCCGAAGCCGCACACGCCGTTCCAGTGGG
AACCGCAGATCACGGAGGAGGAGATCGTCGACAAGCAGCGCCACCTGCGCGGCGAGCTCAAAAAGAAAAAGCTGATCATG
AAATGGCAGGACGCCTCCCTCTCCGGGATGGAAGGGGTATTCGCCCGCGGCGACCGGCGGCTGTCTCGCTTGCTCATCGA
AGCGCACCGCCTCGGCTGCCGCTTTGACGGCTGGTGGGAACATTTCGACCGCCTGAAATGGGCCCAGGCCTTCGAGGCGA
GCGGCATCGACGCCTCGTTTTACCTGCGTCGCCGCGAGACCGACGAGTTGCTTCCCTGGGACCACATCGACTGCGGCGTG
AAGAAAGAGTTCCTGCTCGCCGAGCTTGCGGCTGCCCTGAAGGAGACCGCCACCCCCGACTGCCGCTTCGACAAATGCAC
CGGTTGCGGCGTCTGCGACTTCGACCAGATCAAGCTGAGGTTGAAGGACCCCGTCCCCTTCGACACCTACGCCACCGAAA
GCGCGCCCGAGGCGCCCGTCGAAGAGGCACAACGGATCAGGATCCGTTTCGAGAAAGTGGGGCGGATGCGCTTCTTGAGC
CACCTGGAGATGCTCACCCTGTTCACCAGGGCCGTCGGGCGCTCCGGGATACCGATCCGCTACTCGCAGGGGTTCCACCC
GCACCCGAAGTTTTCCTTCGCCACAGCGCTCTCTGTAGGTATCGTCTCCTACGCTGAGTACATGGATTTCGAGGTAAATG
CCGGTTATACGGCAGCCGAGCTGGAGCGGGCCCTGAACGGGAGCCTGCCCGAGGGGGTCCGGGTGCTGGAGGCGACCGAG
ATTCCACTGCGGGCGCCGGCGCTCTCCGTCATCATGGACAAGGTGCGTTACCGGGTAACCCTTCCGGAAGAACTTGCCCA
TGACCTGCAGGCGAAGGTCGAGGCTTTCCTCGCCCTGGAATCGTCACCGCTCAAGCGGGAGAAGAAGGGTAAATCCACCG
AGTTCGACCTGCGCCACGAGCTGGCAGAGCTGAAGGTCGAGGGGAGCGCGCTGGAGATGGTGGTCGGCCGGGGCAAGCCC
GTCGAGTTCACCTGCGCCATCCTGGATGTGCAGCCCGAGGCGCTGAAAGAGGCGCGGCTGGAGAAGCTGGAAGTACTCTT
CTCCTGA

Upstream 100 bases:

>100_bases
TCCCATGTTGCGGCAGCGCTGGGGCATATTACCTTGCCAGTGCGGAAGAATTTTTGTTATTATGGCCGGTCTTAGCTGAA
AAGCGGTATCCGGGGGTTTT

Downstream 100 bases:

>100_bases
AAATCCGTTCAACGTTCTGCGTTCAACGTGTGCAACCGGCGTGCTCGTCGGGAAGGGCTGGTGACGGCTCGTGCCTCGGC
TCTGGCTGTAAAAACTGTTT

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 828; Mature: 827

Protein sequence:

>828_residues
MSNNILLSVEKPARYMGGEMGTVSGREGALEFVLAFPDVYEIGMSHLGLQVLYGVLKEVPWIMPERAYAPWPDLEESLRT
QGKPLVTLERSLPLIEADVVGFTLQYELSYTNILNMLDLSGIPLLASERNEGYPLILGGGPCAYNPEPLADFFDAFLIGD
GEDAIVEIADCVRQWKEEKLPKSVLLEQLARIQGVYVPCFFEVSYRPDGAVEKIAPLLAGYGSVKRRFVADLESAYYPTS
PVVPFLKTVHDRVSVEISRGCTRGCRFCQAGYIYRPVRERSPERVLEIVEETLGNTGYDEVSLLSLSTGDYGCLTPLLKG
LMDRYASQKKAVSLPSMRVGSLSPEMAEEIRRVRKTGFTLAPEAGSERLRRVINKGITEEALLENARAVYSNGWRLIKLY
FMIGLPTETMEDLDRIVEISREVKRQGKFAGNGGDVNVSVSSFVPKPHTPFQWEPQITEEEIVDKQRHLRGELKKKKLIM
KWQDASLSGMEGVFARGDRRLSRLLIEAHRLGCRFDGWWEHFDRLKWAQAFEASGIDASFYLRRRETDELLPWDHIDCGV
KKEFLLAELAAALKETATPDCRFDKCTGCGVCDFDQIKLRLKDPVPFDTYATESAPEAPVEEAQRIRIRFEKVGRMRFLS
HLEMLTLFTRAVGRSGIPIRYSQGFHPHPKFSFATALSVGIVSYAEYMDFEVNAGYTAAELERALNGSLPEGVRVLEATE
IPLRAPALSVIMDKVRYRVTLPEELAHDLQAKVEAFLALESSPLKREKKGKSTEFDLRHELAELKVEGSALEMVVGRGKP
VEFTCAILDVQPEALKEARLEKLEVLFS

Sequences:

>Translated_828_residues
MSNNILLSVEKPARYMGGEMGTVSGREGALEFVLAFPDVYEIGMSHLGLQVLYGVLKEVPWIMPERAYAPWPDLEESLRT
QGKPLVTLERSLPLIEADVVGFTLQYELSYTNILNMLDLSGIPLLASERNEGYPLILGGGPCAYNPEPLADFFDAFLIGD
GEDAIVEIADCVRQWKEEKLPKSVLLEQLARIQGVYVPCFFEVSYRPDGAVEKIAPLLAGYGSVKRRFVADLESAYYPTS
PVVPFLKTVHDRVSVEISRGCTRGCRFCQAGYIYRPVRERSPERVLEIVEETLGNTGYDEVSLLSLSTGDYGCLTPLLKG
LMDRYASQKKAVSLPSMRVGSLSPEMAEEIRRVRKTGFTLAPEAGSERLRRVINKGITEEALLENARAVYSNGWRLIKLY
FMIGLPTETMEDLDRIVEISREVKRQGKFAGNGGDVNVSVSSFVPKPHTPFQWEPQITEEEIVDKQRHLRGELKKKKLIM
KWQDASLSGMEGVFARGDRRLSRLLIEAHRLGCRFDGWWEHFDRLKWAQAFEASGIDASFYLRRRETDELLPWDHIDCGV
KKEFLLAELAAALKETATPDCRFDKCTGCGVCDFDQIKLRLKDPVPFDTYATESAPEAPVEEAQRIRIRFEKVGRMRFLS
HLEMLTLFTRAVGRSGIPIRYSQGFHPHPKFSFATALSVGIVSYAEYMDFEVNAGYTAAELERALNGSLPEGVRVLEATE
IPLRAPALSVIMDKVRYRVTLPEELAHDLQAKVEAFLALESSPLKREKKGKSTEFDLRHELAELKVEGSALEMVVGRGKP
VEFTCAILDVQPEALKEARLEKLEVLFS
>Mature_827_residues
SNNILLSVEKPARYMGGEMGTVSGREGALEFVLAFPDVYEIGMSHLGLQVLYGVLKEVPWIMPERAYAPWPDLEESLRTQ
GKPLVTLERSLPLIEADVVGFTLQYELSYTNILNMLDLSGIPLLASERNEGYPLILGGGPCAYNPEPLADFFDAFLIGDG
EDAIVEIADCVRQWKEEKLPKSVLLEQLARIQGVYVPCFFEVSYRPDGAVEKIAPLLAGYGSVKRRFVADLESAYYPTSP
VVPFLKTVHDRVSVEISRGCTRGCRFCQAGYIYRPVRERSPERVLEIVEETLGNTGYDEVSLLSLSTGDYGCLTPLLKGL
MDRYASQKKAVSLPSMRVGSLSPEMAEEIRRVRKTGFTLAPEAGSERLRRVINKGITEEALLENARAVYSNGWRLIKLYF
MIGLPTETMEDLDRIVEISREVKRQGKFAGNGGDVNVSVSSFVPKPHTPFQWEPQITEEEIVDKQRHLRGELKKKKLIMK
WQDASLSGMEGVFARGDRRLSRLLIEAHRLGCRFDGWWEHFDRLKWAQAFEASGIDASFYLRRRETDELLPWDHIDCGVK
KEFLLAELAAALKETATPDCRFDKCTGCGVCDFDQIKLRLKDPVPFDTYATESAPEAPVEEAQRIRIRFEKVGRMRFLSH
LEMLTLFTRAVGRSGIPIRYSQGFHPHPKFSFATALSVGIVSYAEYMDFEVNAGYTAAELERALNGSLPEGVRVLEATEI
PLRAPALSVIMDKVRYRVTLPEELAHDLQAKVEAFLALESSPLKREKKGKSTEFDLRHELAELKVEGSALEMVVGRGKPV
EFTCAILDVQPEALKEARLEKLEVLFS

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 93119; Mature: 92988

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNILLSVEKPARYMGGEMGTVSGREGALEFVLAFPDVYEIGMSHLGLQVLYGVLKEVP
CCCCEEEEECCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
WIMPERAYAPWPDLEESLRTQGKPLVTLERSLPLIEADVVGFTLQYELSYTNILNMLDLS
CCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHHHHHHCC
GIPLLASERNEGYPLILGGGPCAYNPEPLADFFDAFLIGDGEDAIVEIADCVRQWKEEKL
CCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCC
PKSVLLEQLARIQGVYVPCFFEVSYRPDGAVEKIAPLLAGYGSVKRRFVADLESAYYPTS
CHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PVVPFLKTVHDRVSVEISRGCTRGCRFCQAGYIYRPVRERSPERVLEIVEETLGNTGYDE
CHHHHHHHHHHHHEEEHHHCCHHHHHHHHCCCEECCHHHCCHHHHHHHHHHHHCCCCCCC
VSLLSLSTGDYGCLTPLLKGLMDRYASQKKAVSLPSMRVGSLSPEMAEEIRRVRKTGFTL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
APEAGSERLRRVINKGITEEALLENARAVYSNGWRLIKLYFMIGLPTETMEDLDRIVEIS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHH
REVKRQGKFAGNGGDVNVSVSSFVPKPHTPFQWEPQITEEEIVDKQRHLRGELKKKKLIM
HHHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KWQDASLSGMEGVFARGDRRLSRLLIEAHRLGCRFDGWWEHFDRLKWAQAFEASGIDASF
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
YLRRRETDELLPWDHIDCGVKKEFLLAELAAALKETATPDCRFDKCTGCGVCDFDQIKLR
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEE
LKDPVPFDTYATESAPEAPVEEAQRIRIRFEKVGRMRFLSHLEMLTLFTRAVGRSGIPIR
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YSQGFHPHPKFSFATALSVGIVSYAEYMDFEVNAGYTAAELERALNGSLPEGVRVLEATE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHCCCCCCCCEEEEECC
IPLRAPALSVIMDKVRYRVTLPEELAHDLQAKVEAFLALESSPLKREKKGKSTEFDLRHE
CCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
LAELKVEGSALEMVVGRGKPVEFTCAILDVQPEALKEARLEKLEVLFS
HHHHEECCCCEEHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNNILLSVEKPARYMGGEMGTVSGREGALEFVLAFPDVYEIGMSHLGLQVLYGVLKEVP
CCCEEEEECCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCC
WIMPERAYAPWPDLEESLRTQGKPLVTLERSLPLIEADVVGFTLQYELSYTNILNMLDLS
CCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEEEEECHHHHHHHHHCC
GIPLLASERNEGYPLILGGGPCAYNPEPLADFFDAFLIGDGEDAIVEIADCVRQWKEEKL
CCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCC
PKSVLLEQLARIQGVYVPCFFEVSYRPDGAVEKIAPLLAGYGSVKRRFVADLESAYYPTS
CHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PVVPFLKTVHDRVSVEISRGCTRGCRFCQAGYIYRPVRERSPERVLEIVEETLGNTGYDE
CHHHHHHHHHHHHEEEHHHCCHHHHHHHHCCCEECCHHHCCHHHHHHHHHHHHCCCCCCC
VSLLSLSTGDYGCLTPLLKGLMDRYASQKKAVSLPSMRVGSLSPEMAEEIRRVRKTGFTL
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
APEAGSERLRRVINKGITEEALLENARAVYSNGWRLIKLYFMIGLPTETMEDLDRIVEIS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHHHHHHHH
REVKRQGKFAGNGGDVNVSVSSFVPKPHTPFQWEPQITEEEIVDKQRHLRGELKKKKLIM
HHHHHCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
KWQDASLSGMEGVFARGDRRLSRLLIEAHRLGCRFDGWWEHFDRLKWAQAFEASGIDASF
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
YLRRRETDELLPWDHIDCGVKKEFLLAELAAALKETATPDCRFDKCTGCGVCDFDQIKLR
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHEE
LKDPVPFDTYATESAPEAPVEEAQRIRIRFEKVGRMRFLSHLEMLTLFTRAVGRSGIPIR
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YSQGFHPHPKFSFATALSVGIVSYAEYMDFEVNAGYTAAELERALNGSLPEGVRVLEATE
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHCCCCCCCCEEEEECC
IPLRAPALSVIMDKVRYRVTLPEELAHDLQAKVEAFLALESSPLKREKKGKSTEFDLRHE
CCCCCHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHH
LAELKVEGSALEMVVGRGKPVEFTCAILDVQPEALKEARLEKLEVLFS
HHHHEECCCCEEHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]