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The map label for this gene is fliC-1 [H]

Identifier: 197116506

GI number: 197116506

Start: 128318

End: 129136

Strand: Direct

Name: fliC-1 [H]

Synonym: Gbem_0106

Alternate gene names: 197116506

Gene position: 128318-129136 (Clockwise)

Preceding gene: 197116505

Following gene: 197116508

Centisome position: 2.78

GC content: 59.22

Gene sequence:

>819_bases
ATGGCAACCAGTGATATTTCTTTGACCGCAGGCATGAGGACCAACCTTCTTAACCTGCAGAACACCAGCCAGCTTCTGAA
CAGAACGCAGCAGAGGCTGTCGTCGGGCAAGCAAGTCAACAGCGCGCTTGACAACCCGACCAACTATTTCGCAGCGCAGA
ACGCGAACCAGCGCGCCAGCGACCTCGCAGACCGCAAGGACGGCATGTCCGAAGGGGTTCAGACGGTTTCGGCAGCCAAC
GCCGGCATCACGGCGATCACCGGTCTGATCAACGCAGCGAAAGGTATTGCACAGTCGGCACTTTCCACCAGCGACACCCT
CACCAGGTCCAAGCTGGCGACCCAGTACGACACCATTCGCAGCCAGATCGACAACATTTCGTCCGACTCCGGCTATCGTG
GCCTGAACCTTTTGAGCGCCAACAACACCCTCACCGTCAACTTCAACGAGAACGCCAGTTCCAGCCTCAACGTCGTCGGG
TTCCTGGCCACGTCCACCGGTCTGAGCATGGGTGCGAACAGCGGCGCCTGGGCCACCGCCTCGGACATCACCACCGACAC
AGCGAAGATGGATACCGCCATCTCGACCTTGAGGTCGAACACCCAGACCCTGGCAGCGAACCTGAACATCATCACCACGC
GCCAGAACTTCACCGACTCGATGATCAACACGCTGCAGACCGGCGCCGACAACCTGACTCTGGCCGACATGAACCAGGAA
GGCGCCAACATGCTGATGCTGCAGACCCGTCAGAGCTTGGGTACCACCTCGCTCTCCATGTCCTCGCAGGCAGCGCAGTC
TGTTCTCAAACTCTTCTAA

Upstream 100 bases:

>100_bases
ATTAATTGGGCACGCAAGGTGTAGAACGGATTCCCCATCGGCCGCAGTAGTAAAAAAACCGGCAAGAAGCCGGAACAAAA
ACCAGAAAGGGGAGAACACC

Downstream 100 bases:

>100_bases
ACCTCAACTCTACCTGGAGGGGGAATCCCCCTCCAGGTACGACCCTGAAGCAGCAATCGACGATCAGGACCCCATTCCCC
CCAGTAGCACCTCCCCACCT

Product: flagellin

Products: NA

Alternate protein names: 25 kDa flagellin [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MATSDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDLADRKDGMSEGVQTVSAAN
AGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVG
FLATSTGLSMGANSGAWATASDITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQE
GANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF

Sequences:

>Translated_272_residues
MATSDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDLADRKDGMSEGVQTVSAAN
AGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVG
FLATSTGLSMGANSGAWATASDITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQE
GANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF
>Mature_271_residues
ATSDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRASDLADRKDGMSEGVQTVSAANA
GITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIRSQIDNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVGF
LATSTGLSMGANSGAWATASDITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQEG
ANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28613; Mature: 28482

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRAS
CCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHEECCCCCHHHH
DLADRKDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIR
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQIDNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVGFLATSTGLSMGANSGAWATA
HHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEC
SDITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQE
CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC
GANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF
CCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ATSDISLTAGMRTNLLNLQNTSQLLNRTQQRLSSGKQVNSALDNPTNYFAAQNANQRAS
CCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHEECCCCCHHHH
DLADRKDGMSEGVQTVSAANAGITAITGLINAAKGIAQSALSTSDTLTRSKLATQYDTIR
HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQIDNISSDSGYRGLNLLSANNTLTVNFNENASSSLNVVGFLATSTGLSMGANSGAWATA
HHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEC
SDITTDTAKMDTAISTLRSNTQTLAANLNIITTRQNFTDSMINTLQTGADNLTLADMNQE
CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCC
GANMLMLQTRQSLGTTSLSMSSQAAQSVLKLF
CCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10940048; 11259647; 3469658 [H]