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The map label for this gene is cooU [C]

Identifier: 197116468

GI number: 197116468

Start: 83690

End: 84217

Strand: Direct

Name: cooU [C]

Synonym: Gbem_0068

Alternate gene names: 197116468

Gene position: 83690-84217 (Clockwise)

Preceding gene: 197116467

Following gene: 197116469

Centisome position: 1.81

GC content: 67.8

Gene sequence:

>528_bases
ATGACCACGTTGATCGATGAGGTTGCCGCCCTCCTCGCCGCTGCGGCGGGGGAAGAGACCGTCGCCACCTGGCGCCGGGA
CCGGAAGGGGGGCCTGACCGGCTGGTGCCGGCTTCCCTCCGCAGACTCGCTCCTTGCCGTGGGGCGCGCCATCGCGTCCA
TACAGGGGCGCCTGAGCATGGTGACGGCCTACCTCACGGAAAAGGCCAGGGAGAAGGGGGGACGCGAGATCGCCTACCAC
TTCGACCTCGACGGCGCCACCCTCACCCTGACCGTTCCCTTGCCGCTGGAAGGGGCGCAGGTCCCTTCCCTCACCCCCAT
CTTCCGCAACTGCGACTGGCACGAGCGGGAGCTGATGGAACTCTACGAGATCCAGGTGGTGGGACACCCCGACCCGCGCC
GGCTGTTCCTGGCCGACAGCGTCCCCGACGCCCCGTTCGAACGGCTCATCCCTTATTCCACCTTCACCAACGGCGCCGGA
GGGAAAGCGCTCTGGGAAAAGGTGCTCGCCGCCAAGGAGAAGCCATGA

Upstream 100 bases:

>100_bases
TCCTGCACGCGGCCTTTCGCCGCCCTACCCCCGAAATCGAACACCTTAAGACCCTCTGTCCGGCCTGCCGGCAACAACTG
AGCATAGGAGCAGTGAGACG

Downstream 100 bases:

>100_bases
GCAGCGTCATCGAACTTGGGCCCCACCAACTGGCCCTCGAGGAGCCGATGTACTTCCGGGTGAAGCTGGAGGGGGATCGC
GTGGCGGGGCTGGACGTGCA

Product: carbon monoxide-induced hydrogenase subunit CooU

Products: NAD+; ubiquinol [C]

Alternate protein names: Carbon Monoxide-Induced Hydrogenase Subunit CooU; Carbon Monoxide-Induced Hydrogenase CooU Subunit; Hydrogenase Subunit CooU

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MTTLIDEVAALLAAAAGEETVATWRRDRKGGLTGWCRLPSADSLLAVGRAIASIQGRLSMVTAYLTEKAREKGGREIAYH
FDLDGATLTLTVPLPLEGAQVPSLTPIFRNCDWHERELMELYEIQVVGHPDPRRLFLADSVPDAPFERLIPYSTFTNGAG
GKALWEKVLAAKEKP

Sequences:

>Translated_175_residues
MTTLIDEVAALLAAAAGEETVATWRRDRKGGLTGWCRLPSADSLLAVGRAIASIQGRLSMVTAYLTEKAREKGGREIAYH
FDLDGATLTLTVPLPLEGAQVPSLTPIFRNCDWHERELMELYEIQVVGHPDPRRLFLADSVPDAPFERLIPYSTFTNGAG
GKALWEKVLAAKEKP
>Mature_174_residues
TTLIDEVAALLAAAAGEETVATWRRDRKGGLTGWCRLPSADSLLAVGRAIASIQGRLSMVTAYLTEKAREKGGREIAYHF
DLDGATLTLTVPLPLEGAQVPSLTPIFRNCDWHERELMELYEIQVVGHPDPRRLFLADSVPDAPFERLIPYSTFTNGAGG
KALWEKVLAAKEKP

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.5 [C]

Molecular weight: Translated: 19174; Mature: 19043

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLIDEVAALLAAAAGEETVATWRRDRKGGLTGWCRLPSADSLLAVGRAIASIQGRLSM
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
VTAYLTEKAREKGGREIAYHFDLDGATLTLTVPLPLEGAQVPSLTPIFRNCDWHERELME
HHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHH
LYEIQVVGHPDPRRLFLADSVPDAPFERLIPYSTFTNGAGGKALWEKVLAAKEKP
HHHEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTLIDEVAALLAAAAGEETVATWRRDRKGGLTGWCRLPSADSLLAVGRAIASIQGRLSM
CHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
VTAYLTEKAREKGGREIAYHFDLDGATLTLTVPLPLEGAQVPSLTPIFRNCDWHERELME
HHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHH
LYEIQVVGHPDPRRLFLADSVPDAPFERLIPYSTFTNGAGGKALWEKVLAAKEKP
HHHEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Iron [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; ubiquinone [C]

Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA