| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is attM [H]
Identifier: 197106247
GI number: 197106247
Start: 3195471
End: 3196304
Strand: Direct
Name: attM [H]
Synonym: PHZ_c2786
Alternate gene names: 197106247
Gene position: 3195471-3196304 (Clockwise)
Preceding gene: 197106245
Following gene: 197106250
Centisome position: 79.96
GC content: 72.78
Gene sequence:
>834_bases ATGATCCGCCGCGCCGCCCTGGCTCTCGCCATCCTCCTCGCCGTTCCGCGCCTGGCCCAGGCGGCGCCGCCGGACGTTCG GCTCTACACGCTGGATTGCGGGCGGCTGGTCGACCAGGACCTCGACCCCTACGCCGACGACGGCGCCTACAAGGGGCTGA AGCGGACCATGGTGGTCCCCTGCTACCTCGTGCGCCACCCGAAGGGCGACCTCCTGTGGGACACCGGCGTGCCGCAGGCC ATCGCCGACATGCCGGGCGGCAAGGCGCCGGGCGGGGTCGAGGTGAAGCGCAAGCTGACCGACCAGCTCGCGGAGCTCGG GCTGTCACCGGCCGACATCGAATACCTGGCGCTGAGCCACAGTCACTTCGACCATATCGGCAACGCCGGCCTGTTCGCCG GCGCCACGTGGATTGTCGATCCCGACGAGCGTGCCTGGGCCTTCCGGCCGCAGGCGCGGGCCAACAAGACCCAGTTCGCC GCCTATTCGGCGCTCGAGACCGCGAAGACGGCCGAGGTGGGCGAGCAGCCCCACGACGTGTTCGGGGACGGCTCGGCGCT GATCGCGCCCGCCCCCGGCCACACCCCGGGCCACACGGTGCTGCTGGTGCGGCTGGCGAAGGCCGGACCGGTGCTGCTGA CCGGCGACCTGTGGCACGCGGCCGAGAGCCGGGCGGGCAAACGCGTGCCGCGGTTCAATGTCGACCGGGCCGAGACGCTC GCCAGCTACGAGGCCGTGGAGGCGCTGGCGGCGCGGGAGAAGGCGCGGGTCGTCCGCCAGCACGTGCCCGAGGACTTCGA GGCGATGCCGAGGTTCCCCGAGCCGCTCCGGTGA
Upstream 100 bases:
>100_bases CACGAACCGACGACGGCGACGCGGGGCGTGGTGCGGCGGGGTGACAGCGGGCGCGCCACGGCGCAGCCTGCGGCCAACTG ATATCTTGGGGATTCCCAGC
Downstream 100 bases:
>100_bases GACCTACGTAGAATCCCCAGGGTGCGGGCGCTCGCGCCCGGGTGGTATCCGCGGCGCCCTCGGGAATTCGTGTTCACGGG CCAGGACCCATTCGCATCCA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: AHL-lactonase AttM [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MIRRAALALAILLAVPRLAQAAPPDVRLYTLDCGRLVDQDLDPYADDGAYKGLKRTMVVPCYLVRHPKGDLLWDTGVPQA IADMPGGKAPGGVEVKRKLTDQLAELGLSPADIEYLALSHSHFDHIGNAGLFAGATWIVDPDERAWAFRPQARANKTQFA AYSALETAKTAEVGEQPHDVFGDGSALIAPAPGHTPGHTVLLVRLAKAGPVLLTGDLWHAAESRAGKRVPRFNVDRAETL ASYEAVEALAAREKARVVRQHVPEDFEAMPRFPEPLR
Sequences:
>Translated_277_residues MIRRAALALAILLAVPRLAQAAPPDVRLYTLDCGRLVDQDLDPYADDGAYKGLKRTMVVPCYLVRHPKGDLLWDTGVPQA IADMPGGKAPGGVEVKRKLTDQLAELGLSPADIEYLALSHSHFDHIGNAGLFAGATWIVDPDERAWAFRPQARANKTQFA AYSALETAKTAEVGEQPHDVFGDGSALIAPAPGHTPGHTVLLVRLAKAGPVLLTGDLWHAAESRAGKRVPRFNVDRAETL ASYEAVEALAAREKARVVRQHVPEDFEAMPRFPEPLR >Mature_277_residues MIRRAALALAILLAVPRLAQAAPPDVRLYTLDCGRLVDQDLDPYADDGAYKGLKRTMVVPCYLVRHPKGDLLWDTGVPQA IADMPGGKAPGGVEVKRKLTDQLAELGLSPADIEYLALSHSHFDHIGNAGLFAGATWIVDPDERAWAFRPQARANKTQFA AYSALETAKTAEVGEQPHDVFGDGSALIAPAPGHTPGHTVLLVRLAKAGPVLLTGDLWHAAESRAGKRVPRFNVDRAETL ASYEAVEALAAREKARVVRQHVPEDFEAMPRFPEPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.1.81 [H]
Molecular weight: Translated: 30011; Mature: 30011
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRAALALAILLAVPRLAQAAPPDVRLYTLDCGRLVDQDLDPYADDGAYKGLKRTMVVP CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHEEE CYLVRHPKGDLLWDTGVPQAIADMPGGKAPGGVEVKRKLTDQLAELGLSPADIEYLALSH EEEEECCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC SHFDHIGNAGLFAGATWIVDPDERAWAFRPQARANKTQFAAYSALETAKTAEVGEQPHDV HHHHHCCCCCHHCCEEEEECCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHH FGDGSALIAPAPGHTPGHTVLLVRLAKAGPVLLTGDLWHAAESRAGKRVPRFNVDRAETL CCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHH ASYEAVEALAAREKARVVRQHVPEDFEAMPRFPEPLR HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC >Mature Secondary Structure MIRRAALALAILLAVPRLAQAAPPDVRLYTLDCGRLVDQDLDPYADDGAYKGLKRTMVVP CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHEEE CYLVRHPKGDLLWDTGVPQAIADMPGGKAPGGVEVKRKLTDQLAELGLSPADIEYLALSH EEEEECCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC SHFDHIGNAGLFAGATWIVDPDERAWAFRPQARANKTQFAAYSALETAKTAEVGEQPHDV HHHHHCCCCCHHCCEEEEECCCCCCEEECCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHH FGDGSALIAPAPGHTPGHTVLLVRLAKAGPVLLTGDLWHAAESRAGKRVPRFNVDRAETL CCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHH ASYEAVEALAAREKARVVRQHVPEDFEAMPRFPEPLR HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA