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The map label for this gene is ytcJ [H]

Identifier: 197106250

GI number: 197106250

Start: 3199664

End: 3201340

Strand: Direct

Name: ytcJ [H]

Synonym: PHZ_c2789

Alternate gene names: 197106250

Gene position: 3199664-3201340 (Clockwise)

Preceding gene: 197106247

Following gene: 197106251

Centisome position: 80.07

GC content: 74.3

Gene sequence:

>1677_bases
ATGCGGACCCCGATTTCCACGCCCCTCGCCCTCCTCGCCCTTGCTCTCCTCGGCGCCGGCCCGGCGAGCGCGCAGGACGC
CGACCTCGTCATCTGGGGCGGCCCGATCCACACGAACGCCCAGGCCCGGCCGACGGCCGAGGCGGTGACGGTGCGCGGCG
GGCGGATCGCCTACGTCGGCGACCGGGCCGGGGCCCAGGCCCAGGTCGGGCCCGGAACCCGGGTGGTGGACCTGAAGGGC
GCGGCCCTGTTCCCCGGCTTCACCGACGGCCACGCCCACCTGCGCGGGATCGGCGAGCGCGAGCTGTCGCTGAACCTGGA
AGGCGCGAAGTCGGCCGCCGAGGTGACCGAGCGGCTGGCGGCGCATCTGGCGGCGCGCAAGCCCGATGGGCCTGTCTGGG
GCCGCGGCTGGATCGAGACGGGCTGGCCCGAGGGCCGCTTCCTGCACCGGAAGGACCTGGACCACGCGGCCCCGCACCAG
CCGGTGCTGCTGGTGCGCGCCGACGGCCATGCGCTGGTCGCCAACACGGCGGCGCTGAAGGCGGCGGGCATCGACGAGAC
GACCAAGGCGCCCGCCGGAGGGGAGATCCTGAAGGACGCGGACGGGCGGCCCACGGGCATGCTGGTGGACAACGCCATGG
ACCTGGTGGCGGACCTGCGGCGGCCGCCCAGCGAGGCCGACAGGCGCGAGGCCTACGCCGCCGCCTTCAAGGTCGAGACG
GCCTACGGCTGGACCGGCGTGCACAGCATGAGCGTCGAGTGGGCCGACGTCGCCCTGCTGGAGGACCTGGCGGCCAAGGG
CCAGGCGCCCCTGCGGGTCTACAACGCCGTGGACGTGGGCCAGGCGGGGCCGCTGCTGGAAGGTGGCCCGCGCGCCAGCC
CGGACGGACGGATCACCACCCGGGCGGTGAAGATCTATGCCGACGGAGCGCTGGGCTCGCGCGGGGCGGCGCTGTTCGAG
CCCTATGCCGACGCGCACCAGACCCGCGGGCTGATCCTGACACCGCCCGAGGAGATGAAGGCGGCGATGGAGAAGGCCTG
GGGCTCGGGGATCCAGGTCGCCACCCACGCCATCGGCGACCGCGGCAACGCCGTGGTGCTGGACCTCTACGAGCAGGTGT
TCGCGAACGTTCCGGCCCATGTGCGGCGGGCCGCGCCGCGCTGGCGGGTCGAGCACGCCCAGGTCGTGCGCCCGGCGGAC
ATCCGGCGCTTCACGGACCATGCGGTGATCGCCTCGATGCAGCCCAGCCACGCCATCGGCGACCTGCACTTCGCCCCCGC
CCGTCTGGGGGACGAACGGCTGGACGGCGCCTATGCCTGGAAGAGCCTGACCGACGCCGGGGCCGTCGTGGTGGGCGGCT
CGGACGCCCCGGTCGAGCGCGGCGATCCCCTGATCGAGTTCTACGCCGCGGTCGCGCGCAAGGACCTCGCCGGCTTCTCG
ACCCCGGCCTGGCGCCCCAAGGAGGCGCTGTCCCGCGCCGAGGCCCTGAAGCTGTTCACCTCGAACGCCGCCTTCGCCCG
CTTCGCCGAGGACGAGCTCGGGAGCATCGAGCCGGGCAAGCGGGCGGACCTGTCGGCCTTCTCGGTCGACCTGATGACCG
CGCCGGCCGAGGCGATCCCCAAGGGCCATGCGGTGCTGACCGTGGTGGACGGCCAGGTGGTGTTCGAACGGCGCTAG

Upstream 100 bases:

>100_bases
CGCGGCCCGCGATGCTCGGCGTACCCATTTTGGGCCCCGTCTTTGGGCTCCCGTCTTTGGGCTCTGGCGCAGCCGCCCCC
CGGCCCGCTAGCCTGGCGGG

Downstream 100 bases:

>100_bases
GCGGGCCGGACCGAGGAACCCCTCGGGGAGCCGGGGGTTGAGGGCGCGACCCGCAACCTCAAGCCTTGGAGCGCCCCGCA
TGGCCCACGAAGTCACCCAA

Product: metal dependent amidohydrolase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRTPISTPLALLALALLGAGPASAQDADLVIWGGPIHTNAQARPTAEAVTVRGGRIAYVGDRAGAQAQVGPGTRVVDLKG
AALFPGFTDGHAHLRGIGERELSLNLEGAKSAAEVTERLAAHLAARKPDGPVWGRGWIETGWPEGRFLHRKDLDHAAPHQ
PVLLVRADGHALVANTAALKAAGIDETTKAPAGGEILKDADGRPTGMLVDNAMDLVADLRRPPSEADRREAYAAAFKVET
AYGWTGVHSMSVEWADVALLEDLAAKGQAPLRVYNAVDVGQAGPLLEGGPRASPDGRITTRAVKIYADGALGSRGAALFE
PYADAHQTRGLILTPPEEMKAAMEKAWGSGIQVATHAIGDRGNAVVLDLYEQVFANVPAHVRRAAPRWRVEHAQVVRPAD
IRRFTDHAVIASMQPSHAIGDLHFAPARLGDERLDGAYAWKSLTDAGAVVVGGSDAPVERGDPLIEFYAAVARKDLAGFS
TPAWRPKEALSRAEALKLFTSNAAFARFAEDELGSIEPGKRADLSAFSVDLMTAPAEAIPKGHAVLTVVDGQVVFERR

Sequences:

>Translated_558_residues
MRTPISTPLALLALALLGAGPASAQDADLVIWGGPIHTNAQARPTAEAVTVRGGRIAYVGDRAGAQAQVGPGTRVVDLKG
AALFPGFTDGHAHLRGIGERELSLNLEGAKSAAEVTERLAAHLAARKPDGPVWGRGWIETGWPEGRFLHRKDLDHAAPHQ
PVLLVRADGHALVANTAALKAAGIDETTKAPAGGEILKDADGRPTGMLVDNAMDLVADLRRPPSEADRREAYAAAFKVET
AYGWTGVHSMSVEWADVALLEDLAAKGQAPLRVYNAVDVGQAGPLLEGGPRASPDGRITTRAVKIYADGALGSRGAALFE
PYADAHQTRGLILTPPEEMKAAMEKAWGSGIQVATHAIGDRGNAVVLDLYEQVFANVPAHVRRAAPRWRVEHAQVVRPAD
IRRFTDHAVIASMQPSHAIGDLHFAPARLGDERLDGAYAWKSLTDAGAVVVGGSDAPVERGDPLIEFYAAVARKDLAGFS
TPAWRPKEALSRAEALKLFTSNAAFARFAEDELGSIEPGKRADLSAFSVDLMTAPAEAIPKGHAVLTVVDGQVVFERR
>Mature_558_residues
MRTPISTPLALLALALLGAGPASAQDADLVIWGGPIHTNAQARPTAEAVTVRGGRIAYVGDRAGAQAQVGPGTRVVDLKG
AALFPGFTDGHAHLRGIGERELSLNLEGAKSAAEVTERLAAHLAARKPDGPVWGRGWIETGWPEGRFLHRKDLDHAAPHQ
PVLLVRADGHALVANTAALKAAGIDETTKAPAGGEILKDADGRPTGMLVDNAMDLVADLRRPPSEADRREAYAAAFKVET
AYGWTGVHSMSVEWADVALLEDLAAKGQAPLRVYNAVDVGQAGPLLEGGPRASPDGRITTRAVKIYADGALGSRGAALFE
PYADAHQTRGLILTPPEEMKAAMEKAWGSGIQVATHAIGDRGNAVVLDLYEQVFANVPAHVRRAAPRWRVEHAQVVRPAD
IRRFTDHAVIASMQPSHAIGDLHFAPARLGDERLDGAYAWKSLTDAGAVVVGGSDAPVERGDPLIEFYAAVARKDLAGFS
TPAWRPKEALSRAEALKLFTSNAAFARFAEDELGSIEPGKRADLSAFSVDLMTAPAEAIPKGHAVLTVVDGQVVFERR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59015; Mature: 59015

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPISTPLALLALALLGAGPASAQDADLVIWGGPIHTNAQARPTAEAVTVRGGRIAYVG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEE
DRAGAQAQVGPGTRVVDLKGAALFPGFTDGHAHLRGIGERELSLNLEGAKSAAEVTERLA
CCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHH
AHLAARKPDGPVWGRGWIETGWPEGRFLHRKDLDHAAPHQPVLLVRADGHALVANTAALK
HHHHHCCCCCCCCCCCCEECCCCCCCEEEHHCCCCCCCCCCEEEEEECCCEEEEECHHHE
AAGIDETTKAPAGGEILKDADGRPTGMLVDNAMDLVADLRRPPSEADRREAYAAAFKVET
ECCCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEE
AYGWTGVHSMSVEWADVALLEDLAAKGQAPLRVYNAVDVGQAGPLLEGGPRASPDGRITT
CCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
RAVKIYADGALGSRGAALFEPYADAHQTRGLILTPPEEMKAAMEKAWGSGIQVATHAIGD
EEEEEEECCCCCCCCCHHHCCHHHHHHCCCEEECCHHHHHHHHHHHCCCCCEEEHHHHCC
RGNAVVLDLYEQVFANVPAHVRRAAPRWRVEHAQVVRPADIRRFTDHAVIASMQPSHAIG
CCCEEEEHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCHHHHHHHCCEEEEECCCCCCCC
DLHFAPARLGDERLDGAYAWKSLTDAGAVVVGGSDAPVERGDPLIEFYAAVARKDLAGFS
CCEECHHHCCHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TPAWRPKEALSRAEALKLFTSNAAFARFAEDELGSIEPGKRADLSAFSVDLMTAPAEAIP
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHCC
KGHAVLTVVDGQVVFERR
CCCEEEEEECCEEEEECC
>Mature Secondary Structure
MRTPISTPLALLALALLGAGPASAQDADLVIWGGPIHTNAQARPTAEAVTVRGGRIAYVG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEE
DRAGAQAQVGPGTRVVDLKGAALFPGFTDGHAHLRGIGERELSLNLEGAKSAAEVTERLA
CCCCCCCCCCCCCEEEEECCCEECCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHH
AHLAARKPDGPVWGRGWIETGWPEGRFLHRKDLDHAAPHQPVLLVRADGHALVANTAALK
HHHHHCCCCCCCCCCCCEECCCCCCCEEEHHCCCCCCCCCCEEEEEECCCEEEEECHHHE
AAGIDETTKAPAGGEILKDADGRPTGMLVDNAMDLVADLRRPPSEADRREAYAAAFKVET
ECCCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEE
AYGWTGVHSMSVEWADVALLEDLAAKGQAPLRVYNAVDVGQAGPLLEGGPRASPDGRITT
CCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEE
RAVKIYADGALGSRGAALFEPYADAHQTRGLILTPPEEMKAAMEKAWGSGIQVATHAIGD
EEEEEEECCCCCCCCCHHHCCHHHHHHCCCEEECCHHHHHHHHHHHCCCCCEEEHHHHCC
RGNAVVLDLYEQVFANVPAHVRRAAPRWRVEHAQVVRPADIRRFTDHAVIASMQPSHAIG
CCCEEEEHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCHHHHHHHCCEEEEECCCCCCCC
DLHFAPARLGDERLDGAYAWKSLTDAGAVVVGGSDAPVERGDPLIEFYAAVARKDLAGFS
CCEECHHHCCHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TPAWRPKEALSRAEALKLFTSNAAFARFAEDELGSIEPGKRADLSAFSVDLMTAPAEAIP
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHCC
KGHAVLTVVDGQVVFERR
CCCEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]