Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106090

Identifier: 197106090

GI number: 197106090

Start: 3018524

End: 3019069

Strand: Direct

Name: 197106090

Synonym: PHZ_c2629

Alternate gene names: NA

Gene position: 3018524-3019069 (Clockwise)

Preceding gene: 197106088

Following gene: 197106094

Centisome position: 75.53

GC content: 74.36

Gene sequence:

>546_bases
ATGAAGAAGTCTCTCCTAGTCGCCGTGGCGGTGCTGACCGCCGCCGGGCCGATCGCGACCTCCGCGGCCATGGCCCAGCC
CCGCGACCGCGAGGTCCGGGAAAGCCGGCGCGAGCTGCGCGAGGAACGCCGCGAGCTGCGCGACGAACGCCACGATGCCC
GCCGCGACGGCGTGGTCACGCCTCGCGAGCGCCGCGCCATCGAGCGCGACCGCCAGGACGTGCGCGAGGCCCGCCGCGAG
CTGCGCTTCGACCGGCGCCGCGCCGAGACCTGGCGCGATCGGGCCGAATGGCGCGCCTATCGCGGCGACCGCCAGGGGTA
CTGGTACGCGCCCGGCTACGGCTACCGGCCCTACATGCGCAGCTACGCCTGGCGGCGCGGCGCCTACGTGCCGCGGGCCT
ACCGCAGCTACTATGTGCAGGACCCCTACTACTACGGCCTGCGCGCCCCGCCCCGCGGCCACCGCTGGGTCTACGCCGAC
GGCAACTTCGTGCTGATGGCGCTCGCCACCGGGCTGATCGCCGAGGTGGTGTCCAACGGCTGGTGA

Upstream 100 bases:

>100_bases
GGAAGCTGAACCGGACCTGACCGGCGAGGTTCAAGGCGGGTTCAGCCGGAGGGCGCGAGGGTGCGGGCGACCAGGGCCAG
AACCCGAAAGGACGCACCCG

Downstream 100 bases:

>100_bases
GGCGTGAGGAGCCCCCGGGAGACCGGGGGCTCCTTCGTTCTAGGCCGCCTCGAACTCGGCGGCGTGTTCGCGGAAGGGCT
TCATCTGCGCGTCCAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE
LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD
GNFVLMALATGLIAEVVSNGW

Sequences:

>Translated_181_residues
MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE
LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD
GNFVLMALATGLIAEVVSNGW
>Mature_181_residues
MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE
LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD
GNFVLMALATGLIAEVVSNGW

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21664; Mature: 21664

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVT
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRERRAIERDRQDVREARRELRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHH
SYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYADGNFVLMALATGLIAEVVSNG
HHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
W
C
>Mature Secondary Structure
MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVT
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRERRAIERDRQDVREARRELRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHH
SYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYADGNFVLMALATGLIAEVVSNG
HHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA