| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106022
Identifier: 197106022
GI number: 197106022
Start: 2942196
End: 2943215
Strand: Reverse
Name: 197106022
Synonym: PHZ_c2561
Alternate gene names: NA
Gene position: 2943215-2942196 (Counterclockwise)
Preceding gene: 197106024
Following gene: 197106019
Centisome position: 73.65
GC content: 69.41
Gene sequence:
>1020_bases ATGGAGGGTTCCGTGGCGCTCGATTCATCGATCCGTTCACGCCTCACGCTGCCGGTCATCTGCGCGCCGATGTTCCTGGT GACCGGCCCCGCGCTGGTGCGCGAAGCCTGCAAGGCGGGTGTGGTCGGGGGGCTGCCGCGGCAGAACGCAGCGGACCTGG AGCGGTTCGACCAGTGGCTGGCGCAGATCCGAGCCGACCTGGATGCGTATCGCGCCGCTGAACCTCAGCGCAGGATTGGC CCCATCGCGGTCAACCTCTCGGTTCGACTGCCGGTGGACGAGCTGAAGGCCTGCCTCGCGGTGTGTCGTCGCCACGGGGT CGAGATCATCATCAGCGCCAGCGGCGACCCGACCGAACTGGTCAAGCACGTGCACGATTGGGGCGGCCGAGTTTTCCACG ACATCACGAGCCTGCGGTTCGCCGAGAAGGCCATCGCGGCCGGCGCCGACGGACTGACCTGCATCGGAGCGGGCGGCGGC GGCCATTCCGGCACGATCAGCCATCTGGCCCTGATCCCCCAGGTGCGGGCGATCTTCGACGGCGTGATCGTGATGGCGGG CGCGGTCTCGACAGGGGCCGCCATCCGCGCCGCCGAAATCCTGGGCGCGGACCTCGCCTACATGGGCACCCGCTTCATCG CCACGCGCGAATCCGACGCGCCGGACGCCTACAAGCAGATGCTGGTCAGCGAGCGTTCCCAGGACCTGATCTACACGGGC GCGATCGCCGGGGTGCCGGCCAACTGGCTGGTGGAATCCATCCGGCGGAACGGGCTCGATCCCGAAAACCTGCCGATCCC GGAGGGGCGCGGCATGAGGCACGACCATCTTCCTGAAGGGGTCAGGCCGTGGAAGACCCTGTGGAGCGCAGGGCAGGGCA TCGACCTCATCGAGGACATCCCGACCGTCTCCGAACTGGTGCTGCGGCTGCGGCGCGAATACGTCGCGGCCTGCGAGACC CCCGACATGGCGGAGGCCGCCCGCCTGGCCGACGAGGCGCTGAGCGCCCCGCGCGCCTGA
Upstream 100 bases:
>100_bases AGGTTCGGCCTTACCTTAGATTGAGGCAGCTGAGTCAGACAAGTGATCCGACGTGTTGTCGAGGCGGCCTGAGGACGATA TGGATAAATCAGTTATATAA
Downstream 100 bases:
>100_bases GCGGAGGGGGCCTTCAGGGCCGCATCGTCAGGCTGACCGGGCCCGGCTTGCGCAGAGGCGCGGCCATGTTGGCGAAGCGG CAAAGGAGCGGGCGCGTCTC
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MEGSVALDSSIRSRLTLPVICAPMFLVTGPALVREACKAGVVGGLPRQNAADLERFDQWLAQIRADLDAYRAAEPQRRIG PIAVNLSVRLPVDELKACLAVCRRHGVEIIISASGDPTELVKHVHDWGGRVFHDITSLRFAEKAIAAGADGLTCIGAGGG GHSGTISHLALIPQVRAIFDGVIVMAGAVSTGAAIRAAEILGADLAYMGTRFIATRESDAPDAYKQMLVSERSQDLIYTG AIAGVPANWLVESIRRNGLDPENLPIPEGRGMRHDHLPEGVRPWKTLWSAGQGIDLIEDIPTVSELVLRLRREYVAACET PDMAEAARLADEALSAPRA
Sequences:
>Translated_339_residues MEGSVALDSSIRSRLTLPVICAPMFLVTGPALVREACKAGVVGGLPRQNAADLERFDQWLAQIRADLDAYRAAEPQRRIG PIAVNLSVRLPVDELKACLAVCRRHGVEIIISASGDPTELVKHVHDWGGRVFHDITSLRFAEKAIAAGADGLTCIGAGGG GHSGTISHLALIPQVRAIFDGVIVMAGAVSTGAAIRAAEILGADLAYMGTRFIATRESDAPDAYKQMLVSERSQDLIYTG AIAGVPANWLVESIRRNGLDPENLPIPEGRGMRHDHLPEGVRPWKTLWSAGQGIDLIEDIPTVSELVLRLRREYVAACET PDMAEAARLADEALSAPRA >Mature_339_residues MEGSVALDSSIRSRLTLPVICAPMFLVTGPALVREACKAGVVGGLPRQNAADLERFDQWLAQIRADLDAYRAAEPQRRIG PIAVNLSVRLPVDELKACLAVCRRHGVEIIISASGDPTELVKHVHDWGGRVFHDITSLRFAEKAIAAGADGLTCIGAGGG GHSGTISHLALIPQVRAIFDGVIVMAGAVSTGAAIRAAEILGADLAYMGTRFIATRESDAPDAYKQMLVSERSQDLIYTG AIAGVPANWLVESIRRNGLDPENLPIPEGRGMRHDHLPEGVRPWKTLWSAGQGIDLIEDIPTVSELVLRLRREYVAACET PDMAEAARLADEALSAPRA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36254; Mature: 36254
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGSVALDSSIRSRLTLPVICAPMFLVTGPALVREACKAGVVGGLPRQNAADLERFDQWL CCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AQIRADLDAYRAAEPQRRIGPIAVNLSVRLPVDELKACLAVCRRHGVEIIISASGDPTEL HHHHHHHHHHHCCCCHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHH VKHVHDWGGRVFHDITSLRFAEKAIAAGADGLTCIGAGGGGHSGTISHLALIPQVRAIFD HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH GVIVMAGAVSTGAAIRAAEILGADLAYMGTRFIATRESDAPDAYKQMLVSERSQDLIYTG HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCEEEEC AIAGVPANWLVESIRRNGLDPENLPIPEGRGMRHDHLPEGVRPWKTLWSAGQGIDLIEDI HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHC PTVSELVLRLRREYVAACETPDMAEAARLADEALSAPRA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEGSVALDSSIRSRLTLPVICAPMFLVTGPALVREACKAGVVGGLPRQNAADLERFDQWL CCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AQIRADLDAYRAAEPQRRIGPIAVNLSVRLPVDELKACLAVCRRHGVEIIISASGDPTEL HHHHHHHHHHHCCCCHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHH VKHVHDWGGRVFHDITSLRFAEKAIAAGADGLTCIGAGGGGHSGTISHLALIPQVRAIFD HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH GVIVMAGAVSTGAAIRAAEILGADLAYMGTRFIATRESDAPDAYKQMLVSERSQDLIYTG HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCEEEEC AIAGVPANWLVESIRRNGLDPENLPIPEGRGMRHDHLPEGVRPWKTLWSAGQGIDLIEDI HHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHC PTVSELVLRLRREYVAACETPDMAEAARLADEALSAPRA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]