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The map label for this gene is mmgC [H]

Identifier: 197105827

GI number: 197105827

Start: 2677498

End: 2678622

Strand: Reverse

Name: mmgC [H]

Synonym: PHZ_c2365

Alternate gene names: 197105827

Gene position: 2678622-2677498 (Counterclockwise)

Preceding gene: 197105828

Following gene: 197105826

Centisome position: 67.03

GC content: 67.29

Gene sequence:

>1125_bases
ATGCTGACTGAGACGCAGACCGCTATACGCGACACCGTGCGTGACTTCGCACTGGCGAAGATCCGCCCGCATTCCGCGGC
GTGGGAAGCCGCTGGCGGGTATCCACCAGGTCTCTTTGCAGAGCTGGCCGACCTTGGCCTGCTGGCGATGACGGCGCCGG
AGGACCAAGGCGGCGCGGGCGCCGACTACGTGAGCTACGCGCTCAGTCTCATGGAGCTGGCGGCCGCAGATGGCGCGCTT
TCCACGATCGTCTCCATCCAGAACAGCCTGATCGTTGGCGGGCTGGTGAAGGACGGGAGTCCGGAACAGAAGGTGCGCTT
CCTGCCGGATCTCGTCGCCGGCCGCGCCATCGGCGCCTTCGCCCTGACCGAAGCGGATGCTGGCTCGGACGCGGCGGCGG
TCAGGACGCGCGCCACTCGCGTCCCGGGCGGCTATCGCCTCAACGGCGCGAAGCAGTTCATCACGTCTGGCAAGATCGCG
AAGCTCGCGATCGTCTTCGCCGTGACGGACCCGGATGCGGGCAAGCGCGGTCTCAGCGCGTTCCTCGTGCCAACCGACCG
GCCTGGGTATGCGGTCGATAAGGTGGAGCACAAGCTGGGGCAGGGCGCCTCCGACACCTGCGCCCTGCGCTTTGACGATC
TCTTCATCGAAGATGAGCTGCGGCTTGGGCCAGAGGGCGCTGGCTACGGGATCGCCCTGTCCAACCTTGAGACGGGGCGG
ATCGGCATCGCGGCCCAGAGCGTCGGCATGGCTCAGGCGGCCCTGGACATCGCCGTGGGTTATGCGCGTCAGCGGACGAG
CTTCGGCGTTCCGATCATCGAGCATCAGGCGGTGGGCTTCCGGCTCGCCGATCTGGCCACGCGTCTTGAGGCGGCTCGGC
AGCTGGTCCTGTCGGCGGCGGCGCTGAAGGACGCCGGCGAGCCGGCGCTGCGCCAGGCGTCAATGGCGAAGCTGTTCGCG
TCGGAGACCGCAGAAGCCGTCGTGTCCGGCGCCATCCAGACTCTCGGCGGATACGGTTACCTTGAGGAGTTCGGCCTCGC
GAAGATCTATCGGGATGTGCGCGTCTGCCAGATCTACGAAGGAACGTCGGACATCCAGCGCCTGGTGATCTGCCGTGGCC
TATGA

Upstream 100 bases:

>100_bases
CACGTGATGGCGCTGGAACTCACAATCGCCTCGGCGCCTGACCGCGCAAACATCGCGTCAACGGTGCTCGCTGCGCGACG
AACAGCTGAAGCCGAACGAG

Downstream 100 bases:

>100_bases
TCGCGACGAACTCGTCACCTACAGCGTCGTTGCGCTGAGCCGGATTACGACGCTCTCGCCGCGAGCGATCCGCCTGTACG
AGGATCGCGGGCTGCTGTTC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLTETQTAIRDTVRDFALAKIRPHSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAGADYVSYALSLMELAAADGAL
STIVSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAFALTEADAGSDAAAVRTRATRVPGGYRLNGAKQFITSGKIA
KLAIVFAVTDPDAGKRGLSAFLVPTDRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGR
IGIAAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAAALKDAGEPALRQASMAKLFA
SETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTSDIQRLVICRGL

Sequences:

>Translated_374_residues
MLTETQTAIRDTVRDFALAKIRPHSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAGADYVSYALSLMELAAADGAL
STIVSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAFALTEADAGSDAAAVRTRATRVPGGYRLNGAKQFITSGKIA
KLAIVFAVTDPDAGKRGLSAFLVPTDRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGR
IGIAAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAAALKDAGEPALRQASMAKLFA
SETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTSDIQRLVICRGL
>Mature_374_residues
MLTETQTAIRDTVRDFALAKIRPHSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAGADYVSYALSLMELAAADGAL
STIVSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAFALTEADAGSDAAAVRTRATRVPGGYRLNGAKQFITSGKIA
KLAIVFAVTDPDAGKRGLSAFLVPTDRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGR
IGIAAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAAALKDAGEPALRQASMAKLFA
SETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYEGTSDIQRLVICRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=369, Percent_Identity=45.2574525745258, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=38.3378016085791, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=36.096256684492, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=36.096256684492, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=34.4, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=36.2017804154303, Blast_Score=216, Evalue=2e-56,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=34.2245989304813, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4501857, Length=374, Percent_Identity=32.620320855615, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI21361497, Length=354, Percent_Identity=34.180790960452, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI76496475, Length=337, Percent_Identity=33.8278931750742, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4557235, Length=337, Percent_Identity=33.8278931750742, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4503943, Length=375, Percent_Identity=30.1333333333333, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI7669494, Length=361, Percent_Identity=29.6398891966759, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI211971008, Length=342, Percent_Identity=30.1169590643275, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI48976061, Length=342, Percent_Identity=30.1169590643275, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI38505218, Length=282, Percent_Identity=30.8510638297872, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI218563752, Length=283, Percent_Identity=29.6819787985866, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI156104864, Length=333, Percent_Identity=25.8258258258258, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI156104866, Length=333, Percent_Identity=25.8258258258258, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI87081958, Length=367, Percent_Identity=32.9700272479564, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI1786223, Length=357, Percent_Identity=30.812324929972, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI87082384, Length=266, Percent_Identity=31.9548872180451, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081702, Length=365, Percent_Identity=27.9452054794521, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=38.0053908355795, Blast_Score=257, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=37.0967741935484, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=34.4, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=36.7724867724868, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=36.604774535809, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=35.3723404255319, Blast_Score=219, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=33.0623306233062, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71990804, Length=286, Percent_Identity=37.4125874125874, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI71985184, Length=343, Percent_Identity=33.5276967930029, Blast_Score=177, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=29.2553191489362, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=370, Percent_Identity=30.8108108108108, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=36.3636363636364, Blast_Score=161, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI17505929, Length=373, Percent_Identity=31.0991957104558, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=30.03663003663, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71985192, Length=278, Percent_Identity=32.0143884892086, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=32.618025751073, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17562446, Length=320, Percent_Identity=29.0625, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=30.4029304029304, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=30.4029304029304, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=32.7586206896552, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21356377, Length=369, Percent_Identity=41.4634146341463, Blast_Score=287, Evalue=9e-78,
Organism=Drosophila melanogaster, GI24646207, Length=369, Percent_Identity=41.4634146341463, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=36.096256684492, Blast_Score=248, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=36.8700265251989, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=34.8284960422164, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI281363737, Length=337, Percent_Identity=34.4213649851632, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI19920834, Length=382, Percent_Identity=33.5078534031414, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI221473076, Length=344, Percent_Identity=26.1627906976744, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45550141, Length=344, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39120; Mature: 39120

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTETQTAIRDTVRDFALAKIRPHSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCC
ADYVSYALSLMELAAADGALSTIVSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAF
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHE
ALTEADAGSDAAAVRTRATRVPGGYRLNGAKQFITSGKIAKLAIVFAVTDPDAGKRGLSA
EEECCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEE
FLVPTDRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGR
EEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCC
IGIAAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAA
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
ALKDAGEPALRQASMAKLFASETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEC
GTSDIQRLVICRGL
CHHHHHHHHHHCCC
>Mature Secondary Structure
MLTETQTAIRDTVRDFALAKIRPHSAAWEAAGGYPPGLFAELADLGLLAMTAPEDQGGAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCC
ADYVSYALSLMELAAADGALSTIVSIQNSLIVGGLVKDGSPEQKVRFLPDLVAGRAIGAF
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHE
ALTEADAGSDAAAVRTRATRVPGGYRLNGAKQFITSGKIAKLAIVFAVTDPDAGKRGLSA
EEECCCCCCCHHHHHHHHHCCCCCEEECHHHHHHHCCCEEEEEEEEEEECCCCCCCCCEE
FLVPTDRPGYAVDKVEHKLGQGASDTCALRFDDLFIEDELRLGPEGAGYGIALSNLETGR
EEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCC
IGIAAQSVGMAQAALDIAVGYARQRTSFGVPIIEHQAVGFRLADLATRLEAARQLVLSAA
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
ALKDAGEPALRQASMAKLFASETAEAVVSGAIQTLGGYGYLEEFGLAKIYRDVRVCQIYE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEC
GTSDIQRLVICRGL
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]