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The map label for this gene is soxR [C]

Identifier: 197105826

GI number: 197105826

Start: 2677143

End: 2677508

Strand: Reverse

Name: soxR [C]

Synonym: PHZ_c2364

Alternate gene names: 197105826

Gene position: 2677508-2677143 (Counterclockwise)

Preceding gene: 197105827

Following gene: 197105825

Centisome position: 67.0

GC content: 66.67

Gene sequence:

>366_bases
GTGGCCTATGATCGCGACGAACTCGTCACCTACAGCGTCGTTGCGCTGAGCCGGATTACGACGCTCTCGCCGCGAGCGAT
CCGCCTGTACGAGGATCGCGGGCTGCTGTTCGCAAAGCGCGACCGGCTGAATAAGCGGCGCTTCGATCGGCAGTCCGTGC
GCCGCCTGGAGCTGATCAAACTGCTCCGGACGGCGGGAATGAGCCTGCGGGACATCCGCGCCATCCTCGCCCTCCAGGAA
GGATCCGTTCAGCGCGCCCAGGTGGCGCGGGCCGCCCTGAGCGCCTTGCGCGAGGACCTGACGAACCGGGTCGCCGCCCT
GGAGGCCGCTGAACATCAACTTATCAAGGCAGTCAGCGCCGCATGA

Upstream 100 bases:

>100_bases
GGTTACCTTGAGGAGTTCGGCCTCGCGAAGATCTATCGGGATGTGCGCGTCTGCCAGATCTACGAAGGAACGTCGGACAT
CCAGCGCCTGGTGATCTGCC

Downstream 100 bases:

>100_bases
ACTCCGATCCCGTCGTCATCGCCGCCTACGCCCGCACGCCGATGGGCGGCTTCCAGGGCGTCCTCTCGGGCGTGAAGGCC
ACCGAGCTCGGCGCCGCCGC

Product: transcriptional regulator, putative MerR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAYDRDELVTYSVVALSRITTLSPRAIRLYEDRGLLFAKRDRLNKRRFDRQSVRRLELIKLLRTAGMSLRDIRAILALQE
GSVQRAQVARAALSALREDLTNRVAALEAAEHQLIKAVSAA

Sequences:

>Translated_121_residues
MAYDRDELVTYSVVALSRITTLSPRAIRLYEDRGLLFAKRDRLNKRRFDRQSVRRLELIKLLRTAGMSLRDIRAILALQE
GSVQRAQVARAALSALREDLTNRVAALEAAEHQLIKAVSAA
>Mature_120_residues
AYDRDELVTYSVVALSRITTLSPRAIRLYEDRGLLFAKRDRLNKRRFDRQSVRRLELIKLLRTAGMSLRDIRAILALQEG
SVQRAQVARAALSALREDLTNRVAALEAAEHQLIKAVSAA

Specific function: Activates The Transcription Of The Soxs Gene Which Itself Controls The Superoxide Response Regulon. Soxr Contains A 2fe-2s Iron-Sulfur Cluster That May Act As A Redox Sensor System That Recognizes Superoxide. The Variable Redox State Of The Fe-S Cluster I

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13703; Mature: 13572

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDRDELVTYSVVALSRITTLSPRAIRLYEDRGLLFAKRDRLNKRRFDRQSVRRLELIK
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHCCHHHHHHHHHHH
LLRTAGMSLRDIRAILALQEGSVQRAQVARAALSALREDLTNRVAALEAAEHQLIKAVSA
HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure 
AYDRDELVTYSVVALSRITTLSPRAIRLYEDRGLLFAKRDRLNKRRFDRQSVRRLELIK
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHCCHHHHHHHHHHH
LLRTAGMSLRDIRAILALQEGSVQRAQVARAALSALREDLTNRVAALEAAEHQLIKAVSA
HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA