| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105716
Identifier: 197105716
GI number: 197105716
Start: 2551943
End: 2554483
Strand: Reverse
Name: 197105716
Synonym: PHZ_c2254
Alternate gene names: NA
Gene position: 2554483-2551943 (Counterclockwise)
Preceding gene: 197105717
Following gene: 197105715
Centisome position: 63.92
GC content: 75.95
Gene sequence:
>2541_bases ATGGATTTCGGCGGCCCTGCGCTGTCGCCGACGCCCGCGAGCGAGCCCGAGGTCGCGCCGGCCGCCGAGCCGGCCGCGAC GCCTGAGGCCCTGCCGCCGCTCGATCCTCCCGCTTCGACCGCCCCGGTGGCGACGCGGGAAGCGAAGACCCCGGCGCCAC GTCCCGAGTTCCAGCCCGAGCCCCGCTACGAGCCGGCGACGCTGGACGAGCTCGAGGCGCCGTCCGGCTGGCCGATCTGG GTGGCGGCCGTGATCGTCTCGGCGCTGTGGGCGCTGGCGCCGATCGCCTACGCGGTGGGCTACCGCAACAACGTCGCCCC GCTGCAGGACGACGCCTTCGCCCTGGCCGTCTTCGCCCTCCTGGCCATCGGGCCGGCCGCCTTCGTCTGGGGCGCGGCGT TCATGATCCGCCAGGGCCAGAAGCTCGCTTTCGAGGCGCGCCGGGCCAAGGCCATGGCCGAGGACATGCTGTCGCCCGCC GTCGTGGCCGCCGCCCGGGCCGGCCACGTGGCCCAGTCGGTCCGCGACGAGATCGCCCGCGCCGGCGCGGCCGCCGAGGA CGCCCGCGAGACCCTGCTCGCGCTGCGCGACGCCCTGGCCCTGGAGACCGAGAAGCTGGCCGACGCGACCTCTCAGTCGG TCCGCACCGCCGAGACCCTGGCCGGGACGCTGGGCCGCGAGCGCAGCGAGATGGGCCAGCTGGCCCAGACCCTGGACGCC CAGGCCGTCAGGGTCGCCGACGCCATCACCCAGCAGGCCAAGATGGTCGCCGAGGCCGCCGACCTCGCCGAGACCCAGAT CCGCGAGGCCGAAACCGCGCTCTCGGCCCGCGCCGCCGACCTGGCCGCCGCCGCGGGCGAGGCGAGCGACGCCGCTCGCA CGGCCGGCGAGGACCTGACCCGCCACATCGCCCGCCTGGAGACCGCCGGCGTGGGCGTCGCCGAGCAGGCGAGGGCGGTT GAGGCCGGCCTGTCGGAACAGCGCGCGGCGCTGATCACCCTGGCCGCCGCCCTGCGCTCGGACCACGAGAGCTTCTCGTC CGAGGCCGACGCGCACGCCGCCCGGCTGTCGGAATTCATCACCCAGGCCCGCCTGTCGGCCGCCGAAATGAGCGACCGGG CGACCAAGGGCGGCGAGGCCCTGCGCCAGCTGATGGCCGACGCGGCGCTGCAGTTCCGCGACCTGGCCGAGACCGCCAAG GCCGAGCGCGAGGAGTTCGGCCAGTCCACCCTGCACGCGCTGGAGGCCGTCTCGGCCGCCGCCGCGGACCAGCGGGGCAA GCTGGAGGCCCAGACCCGCGCCGCCATCGACGCCCTCGCGGCCGCGGCCGAGGAGACCCGGGAGGCGGCCGCCCGCCACG CGGCCACCGCCCGCGAGCAGGTGGACCAGCTCTCGGAGGCGGCCTTCACCGCCGGTCAGAAGGCCAACCAGGTCTTCGAG GCCCGCCTGGAGGAGGCCCGGGCCCTCGTCGAGCAGTCCTCGAAGATGGTCGAGGAAGCGGGGGCCGCCACGGCGCGGAA GCTGGACGAGGGCGCCGCCGCCGCCCGGGCCGCGCTGGAGGAGCTGGCTGGCATGCTGGGCGAACTGGAGCAGCGCGCCT CGCGCCTGCCGGTCGCCGCGCGGGGCCAGGCCGAGCAGGTCAAGGCCGCCGTGGCCCATGGCATGGACGAGCTGATGGAG CACGCGCGCCGTACGGCCGAGGAGGCCCAGGCGATCGACGCGGCCTTCCAGGAGCGCGTGCGCCGCAACTTCGACATGCT GTCCGAAGCCGTGCGCCTGATGGGGACGGTCGCCGCCGCGCCCGCACCGCTGCCGCCGCTCGCGGCCGCCCCGCCCCGGC GGGCGAAGTCCGCGCCCGTCGAGCCGCCGCCGGCCGAGGAGGCCGAACCGCTGGAGCTCAATGAGCTGGCCGACGAGACC AGCGCCCAGGGCGCATTGGCCGATGACGCCGAGCCGCCGGGCGAGGCGCTGGCCCAGGAACTGGGCGTGCGGGGTCGGCT GAAGCTGACCCCCACCGCCACCGACCGCGAGTTCAGCGCCGTGTTTTCGGCCGCCGCAGGTCGTCCGGCCGCGCCGGCGC CCGAAGCCGCGGAGGAGGCGGAGGCCGAGGCTCCGAACGCCTCGGGCGAGACCTGGACCTGGAAGGACCTGCTGGCCTCG CTGGACGGCGGCGAGGGCGAGGGGGAACGCCTCGAGGACGCCCTGGCGGCCGAGCTGGTCCGAATGGGGGTCGAGCCGGC CAAGCTCCTGCCGAAGAACCGGATCGACGAGATCGCCGCCGCAGTCCAGACGGGGGACGAGGAGGGCGCGCGCCAGGTCG TGAAGAAGCTGGCGCCCGCCGCGACCCGCCGCATCGCCCGGCGCCTGTTCACGGACGAGACGGTCAAGCACCAGACCGAG GTCTACCTGCGGCGCTACAAGACGCTGATCGACGACGCCGTGGTCCGCGACCCGCAGGGCTTCCTGATGGCCGAGCTGCT GTCGGGAGACGCCGGCCGGCTCTACCTGCTGCTCGACGCGGCCGCCGGGGGGATGCTGTAG
Upstream 100 bases:
>100_bases GCGCGGTGGGGGCGAGCCATGCCGGCCCCCTCGTGACGCGCGCCTCGGGCCAAGAGGGAAGGATCGGCCGCGCATGAAGT TCTCCAAGCGGCGACAACCG
Downstream 100 bases:
>100_bases GGAACCTGGGCGGCGCCGACCCGCGTTAGGCGGATGATGGACCGTGACCGCGCCCACACCGCCTGGAGCCGAGCCGAGCG CATCCGCCGGCTCTCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML
Sequences:
>Translated_846_residues MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML >Mature_846_residues MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPEPRYEPATLDELEAPSGWPIW VAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFALLAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPA VVAAARAGHVAQSVRDEIARAGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLTRHIARLETAGVGVAEQARAV EAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFITQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAK AEREEFGQSTLHALEAVSAAAADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAARGQAEQVKAAVAHGMDELME HARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAAPAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADET SAQGALADDAEPPGEALAQELGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPAATRRIARRLFTDETVKHQTE VYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDAAAGGML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88774; Mature: 88774
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRYEPATLDELEAPSGWPIWVAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFAL CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPAVVAAARAGHVAQSVRDEIAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RHIARLETAGVGVAEQARAVEAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFI HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAKAEREEFGQSTLHALEAVSAA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGQAEQVKAAVAHGMDELMEHARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADETSAQGALADDAEPPGEALAQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHH LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATRRIARRLFTDETVKHQTEVYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC AAGGML CCCCCC >Mature Secondary Structure MDFGGPALSPTPASEPEVAPAAEPAATPEALPPLDPPASTAPVATREAKTPAPRPEFQPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRYEPATLDELEAPSGWPIWVAAVIVSALWALAPIAYAVGYRNNVAPLQDDAFALAVFAL CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LAIGPAAFVWGAAFMIRQGQKLAFEARRAKAMAEDMLSPAVVAAARAGHVAQSVRDEIAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAAAEDARETLLALRDALALETEKLADATSQSVRTAETLAGTLGRERSEMGQLAQTLDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVRVADAITQQAKMVAEAADLAETQIREAETALSARAADLAAAAGEASDAARTAGEDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RHIARLETAGVGVAEQARAVEAGLSEQRAALITLAAALRSDHESFSSEADAHAARLSEFI HHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQARLSAAEMSDRATKGGEALRQLMADAALQFRDLAETAKAEREEFGQSTLHALEAVSAA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AADQRGKLEAQTRAAIDALAAAAEETREAAARHAATAREQVDQLSEAAFTAGQKANQVFE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ARLEEARALVEQSSKMVEEAGAATARKLDEGAAAARAALEELAGMLGELEQRASRLPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGQAEQVKAAVAHGMDELMEHARRTAEEAQAIDAAFQERVRRNFDMLSEAVRLMGTVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPLPPLAAAPPRRAKSAPVEPPPAEEAEPLELNELADETSAQGALADDAEPPGEALAQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH LGVRGRLKLTPTATDREFSAVFSAAAGRPAAPAPEAAEEAEAEAPNASGETWTWKDLLAS HCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHH LDGGEGEGERLEDALAAELVRMGVEPAKLLPKNRIDEIAAAVQTGDEEGARQVVKKLAPA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ATRRIARRLFTDETVKHQTEVYLRRYKTLIDDAVVRDPQGFLMAELLSGDAGRLYLLLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEC AAGGML CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA