| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is aat
Identifier: 197105315
GI number: 197105315
Start: 2074865
End: 2075530
Strand: Direct
Name: aat
Synonym: PHZ_c1852
Alternate gene names: 197105315
Gene position: 2074865-2075530 (Clockwise)
Preceding gene: 197105314
Following gene: 197105318
Centisome position: 51.92
GC content: 71.77
Gene sequence:
>666_bases ATGGCGGAGTTCGACGCCCGCGACCTCCTGGACTGCTACGCCCGCGGGGTGTTCCCCATGGCCGACGCGCGGGAGGACGC CCGGGTCTTCCTGATCGATCCCGAGCGGCGCGGCGTGATCCCGCTCGAGGCCTTCCACGTCCCCCGGCGACTGGCGCGGA CGGTGCGGGGCGATCCCTTCGAGATCCGCATCGATGCGGCCTTCCACGACGTCGTGCTGGCTTGCGCCGCATCGGGGCCC GGCCGGACCGAGACCTGGATCAACCGGCCTATCGAGCAGCTGTACCTTGAGCTCCACGAACTCGGCTTCGCCCACAGCGT CGAATGCTGGCAGGGAGAGCGGCTGGTCGGCGGCCTCTACGGCGTGTCGCTGCAGGGGGCGTTCTTCGGCGAGAGCATGT TCTCCCGCGTGCGCGACGCCTCGAAGGTCGCGCTCGTGCACCTCGTCGCGCGGCTGATCGCGGGCGGCTTCACGCTGCTG GACGCCCAGTTCATGACCGAGCACCTGGCGCAGTTCGGCGCCCGGGAGATTCCCCGCCGGGAGTACCATCGGCGGCTGGA CCGGGCCCTCGCCGCCCCGGCGGACTTCTACGCCTTGGGCGCGGCCGCCCCTTCAGCCGACGGCGCGGGGCGGTTGGCCC TGCAGCTGATCACCCAGGCGTCGTAG
Upstream 100 bases:
>100_bases GCGGCGACTACAACATCCATTGGCTGGAGCGCTGGATGAAGGCCCAGGCGGAGTCCGCCTAGGCCTCGCGCCGCCCCGCC CGCTGCGCTAGGCGTATCGC
Downstream 100 bases:
>100_bases GTGGCGTGCTCCATCGGGTTCAGACCCGGGGACGATGCGTACATCCACCCCCTGAACGCCTGCCGCGGCGGCGGCGTGGG CCGGCCCGGCTGCGGCCGGG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAEFDARDLLDCYARGVFPMADAREDARVFLIDPERRGVIPLEAFHVPRRLARTVRGDPFEIRIDAAFHDVVLACAASGP GRTETWINRPIEQLYLELHELGFAHSVECWQGERLVGGLYGVSLQGAFFGESMFSRVRDASKVALVHLVARLIAGGFTLL DAQFMTEHLAQFGAREIPRREYHRRLDRALAAPADFYALGAAAPSADGAGRLALQLITQAS
Sequences:
>Translated_221_residues MAEFDARDLLDCYARGVFPMADAREDARVFLIDPERRGVIPLEAFHVPRRLARTVRGDPFEIRIDAAFHDVVLACAASGP GRTETWINRPIEQLYLELHELGFAHSVECWQGERLVGGLYGVSLQGAFFGESMFSRVRDASKVALVHLVARLIAGGFTLL DAQFMTEHLAQFGAREIPRREYHRRLDRALAAPADFYALGAAAPSADGAGRLALQLITQAS >Mature_220_residues AEFDARDLLDCYARGVFPMADAREDARVFLIDPERRGVIPLEAFHVPRRLARTVRGDPFEIRIDAAFHDVVLACAASGPG RTETWINRPIEQLYLELHELGFAHSVECWQGERLVGGLYGVSLQGAFFGESMFSRVRDASKVALVHLVARLIAGGFTLLD AQFMTEHLAQFGAREIPRREYHRRLDRALAAPADFYALGAAAPSADGAGRLALQLITQAS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=193, Percent_Identity=39.3782383419689, Blast_Score=135, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_PHEZH (B4RCS6)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002130692.1 - GeneID: 6791367 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c1852 - HOGENOM: HBG485363 - OMA: IGESMFY - ProtClustDB: PRK00301 - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 24450; Mature: 24319
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFDARDLLDCYARGVFPMADAREDARVFLIDPERRGVIPLEAFHVPRRLARTVRGDPF CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE EIRIDAAFHDVVLACAASGPGRTETWINRPIEQLYLELHELGFAHSVECWQGERLVGGLY EEEECHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHH GVSLQGAFFGESMFSRVRDASKVALVHLVARLIAGGFTLLDAQFMTEHLAQFGAREIPRR CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCHH EYHRRLDRALAAPADFYALGAAAPSADGAGRLALQLITQAS HHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AEFDARDLLDCYARGVFPMADAREDARVFLIDPERRGVIPLEAFHVPRRLARTVRGDPF CCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE EIRIDAAFHDVVLACAASGPGRTETWINRPIEQLYLELHELGFAHSVECWQGERLVGGLY EEEECHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHH GVSLQGAFFGESMFSRVRDASKVALVHLVARLIAGGFTLLDAQFMTEHLAQFGAREIPRR CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHCCCHH EYHRRLDRALAAPADFYALGAAAPSADGAGRLALQLITQAS HHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA