| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is bcp [H]
Identifier: 197105299
GI number: 197105299
Start: 2056677
End: 2057138
Strand: Direct
Name: bcp [H]
Synonym: PHZ_c1836
Alternate gene names: 197105299
Gene position: 2056677-2057138 (Clockwise)
Preceding gene: 197105298
Following gene: 197105300
Centisome position: 51.47
GC content: 68.18
Gene sequence:
>462_bases ATGTCGGACGTGATCGAGGGCGCGCCGGCGCCCGACTTCGAGCTGGAGACCGCCGACGGCCCCGTCCGCCTGTCGGACTT CGCTGGCAAGACCCTGGTGCTCTACTTCTATCCGAAGGACGACACGAGCGGCTGCACGCGCGAGGCGCAGGACTTCACGG CGCTCGCGCCCGAGTTCGCCAAGGCGGGCGCGACGGTGGTCGGCGTCTCGAAGGACAGCGTGAAGTCGCACGAGAAGTTC GCCGCCAAGCACGGCCTGGCCGTGACGCTGGGGTCCGACCCTGAGGGCGCGGTGATCGAACGCTACGGCTCGTGGGTGGA GAAGAGCCTCTATGGCCGCAAGTACATGGGGATCGACCGGTCCACCTTCCTGATCCGCGACGGCCGGATCGTCCGCATCT GGCGCAAGGTGAAGGTTCCCAACCACGCGCAGCAGGTGCTGGAGGCGGTCAGGGCGCGGTAA
Upstream 100 bases:
>100_bases GCGCCTCGTCAGCGAGGCCGACCTCGTGGACGGCGTCGTGAAGCTCGCCGCGGGCAAGAAGAAGATCGTCCTGGTGAAGC CGGTCTGAGGGAGAGACGAG
Downstream 100 bases:
>100_bases GCGGCGCTGTGGCGGCGGCGCCGCAGTCCGCAGGTTTGTGCGCCGGCGGATGGACGAAGGCGCAAACCGCATTCATCCTG CGGCTACGCGCCGCTTTTGC
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSDVIEGAPAPDFELETADGPVRLSDFAGKTLVLYFYPKDDTSGCTREAQDFTALAPEFAKAGATVVGVSKDSVKSHEKF AAKHGLAVTLGSDPEGAVIERYGSWVEKSLYGRKYMGIDRSTFLIRDGRIVRIWRKVKVPNHAQQVLEAVRAR
Sequences:
>Translated_153_residues MSDVIEGAPAPDFELETADGPVRLSDFAGKTLVLYFYPKDDTSGCTREAQDFTALAPEFAKAGATVVGVSKDSVKSHEKF AAKHGLAVTLGSDPEGAVIERYGSWVEKSLYGRKYMGIDRSTFLIRDGRIVRIWRKVKVPNHAQQVLEAVRAR >Mature_152_residues SDVIEGAPAPDFELETADGPVRLSDFAGKTLVLYFYPKDDTSGCTREAQDFTALAPEFAKAGATVVGVSKDSVKSHEKFA AKHGLAVTLGSDPEGAVIERYGSWVEKSLYGRKYMGIDRSTFLIRDGRIVRIWRKVKVPNHAQQVLEAVRAR
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=40.5228758169935, Blast_Score=107, Evalue=5e-25,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16804; Mature: 16673
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVIEGAPAPDFELETADGPVRLSDFAGKTLVLYFYPKDDTSGCTREAQDFTALAPEFA CCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCHHHH KAGATVVGVSKDSVKSHEKFAAKHGLAVTLGSDPEGAVIERYGSWVEKSLYGRKYMGIDR HCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCC STFLIRDGRIVRIWRKVKVPNHAQQVLEAVRAR CEEEEECCEEEEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure SDVIEGAPAPDFELETADGPVRLSDFAGKTLVLYFYPKDDTSGCTREAQDFTALAPEFA CCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCHHHH KAGATVVGVSKDSVKSHEKFAAKHGLAVTLGSDPEGAVIERYGSWVEKSLYGRKYMGIDR HCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCC STFLIRDGRIVRIWRKVKVPNHAQQVLEAVRAR CEEEEECCEEEEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]