| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is cdsA [H]
Identifier: 197105238
GI number: 197105238
Start: 1986498
End: 1987322
Strand: Reverse
Name: cdsA [H]
Synonym: PHZ_c1775
Alternate gene names: 197105238
Gene position: 1987322-1986498 (Counterclockwise)
Preceding gene: 197105239
Following gene: 197105237
Centisome position: 49.73
GC content: 72.36
Gene sequence:
>825_bases ATGACGTCCTCGCCGCCGGCTAAGCGCTTCGACTGGTCCAACCTCGGCCTGCGGATCGCCTCGGCCGTCGTGATCGGGCC GGCCGCGGTCGGCGCGGCCTGGATCGGCGGCTGGCCCTATCTCGTCCTCATCGCCATCGGTGTGGCGCTGCTGGCCCTCG AGTGGGGCGGCATGAGCGCGCCGGTCGCCCCGACCCGCGTTTCGGCCGCCGTGACCGTGGCCGTCCTCGCCGCCGTCTTC CTCGCCTATCAGGACCAGGACCTGCTGGCCTGGACGGCGGTGGCGGTCGGCGCCGCCGCCGCCGCCCTGGTGGCTCGGGG CGTCGCCGAGCGGCCGGCGGACGCCGCTTTCGGCGTGATCTACATCGCCCCCGCCGCCATCTGCCTCGTCTGGCTGCGCT CCACCGACCAGGGCCACTGGTGGATGATGACCCTGTTCGCGGCCACCTGGGCCGCCGACATCGGCGCCTTCGCCGTCGGC AGCCTGCTGAAGGGGCCCAAGCTCTGGCCGAGGTTCTCGCCCAACAAGACCTGGTCGGGATTCGTCGGCGGGCTCGCCGC CTCGTCGCTGGCGGGTCTCGCGATGGCCTCGCTTCGCGCCTTCGACCTCAACCTCGCCGCGGCGGCCCTGGTCGGCCTGT CGGTGGGCCTGGCCACCATGGCCGGCGACCTGTGGGAATCGGCGCTCAAGCGCCGGTTCGGGGTGAAGGATTCGGGCGAC CTCATTCCGGGTCACGGGGGCCTGCTCGACCGCGTGGACGGCCTCATGTTCGCCGTGGTCGTGATGGCTGTGGTGCGTCT CGCCAACATCTGGGGATGGCATTGA
Upstream 100 bases:
>100_bases TTCCAGGACGTGCTCTGGCCGGACTACGGGGCCGAACACCTGAAGGCGGCGCTCGCCGCCTTCGCCGCCCGGGACCGACG CTATGGCGCGATCGTGGCCG
Downstream 100 bases:
>100_bases ATCTGCCGCGTAAGGTCAGCGTCCTGGGATCCACGGGCTCGGTGGGGGTTTCGACCCTCGACCTGTTCCAACAGGCCGGC GTCGAGGTCGACGTCGTCGC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTSSPPAKRFDWSNLGLRIASAVVIGPAAVGAAWIGGWPYLVLIAIGVALLALEWGGMSAPVAPTRVSAAVTVAVLAAVF LAYQDQDLLAWTAVAVGAAAAALVARGVAERPADAAFGVIYIAPAAICLVWLRSTDQGHWWMMTLFAATWAADIGAFAVG SLLKGPKLWPRFSPNKTWSGFVGGLAASSLAGLAMASLRAFDLNLAAAALVGLSVGLATMAGDLWESALKRRFGVKDSGD LIPGHGGLLDRVDGLMFAVVVMAVVRLANIWGWH
Sequences:
>Translated_274_residues MTSSPPAKRFDWSNLGLRIASAVVIGPAAVGAAWIGGWPYLVLIAIGVALLALEWGGMSAPVAPTRVSAAVTVAVLAAVF LAYQDQDLLAWTAVAVGAAAAALVARGVAERPADAAFGVIYIAPAAICLVWLRSTDQGHWWMMTLFAATWAADIGAFAVG SLLKGPKLWPRFSPNKTWSGFVGGLAASSLAGLAMASLRAFDLNLAAAALVGLSVGLATMAGDLWESALKRRFGVKDSGD LIPGHGGLLDRVDGLMFAVVVMAVVRLANIWGWH >Mature_273_residues TSSPPAKRFDWSNLGLRIASAVVIGPAAVGAAWIGGWPYLVLIAIGVALLALEWGGMSAPVAPTRVSAAVTVAVLAAVFL AYQDQDLLAWTAVAVGAAAAALVARGVAERPADAAFGVIYIAPAAICLVWLRSTDQGHWWMMTLFAATWAADIGAFAVGS LLKGPKLWPRFSPNKTWSGFVGGLAASSLAGLAMASLRAFDLNLAAAALVGLSVGLATMAGDLWESALKRRFGVKDSGDL IPGHGGLLDRVDGLMFAVVVMAVVRLANIWGWH
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=157, Percent_Identity=40.1273885350318, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787677, Length=110, Percent_Identity=43.6363636363636, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28374; Mature: 28243
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPPAKRFDWSNLGLRIASAVVIGPAAVGAAWIGGWPYLVLIAIGVALLALEWGGMSA CCCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC PVAPTRVSAAVTVAVLAAVFLAYQDQDLLAWTAVAVGAAAAALVARGVAERPADAAFGVI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH YIAPAAICLVWLRSTDQGHWWMMTLFAATWAADIGAFAVGSLLKGPKLWPRFSPNKTWSG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH FVGGLAASSLAGLAMASLRAFDLNLAAAALVGLSVGLATMAGDLWESALKRRFGVKDSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LIPGHGGLLDRVDGLMFAVVVMAVVRLANIWGWH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSSPPAKRFDWSNLGLRIASAVVIGPAAVGAAWIGGWPYLVLIAIGVALLALEWGGMSA CCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC PVAPTRVSAAVTVAVLAAVFLAYQDQDLLAWTAVAVGAAAAALVARGVAERPADAAFGVI CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH YIAPAAICLVWLRSTDQGHWWMMTLFAATWAADIGAFAVGSLLKGPKLWPRFSPNKTWSG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH FVGGLAASSLAGLAMASLRAFDLNLAAAALVGLSVGLATMAGDLWESALKRRFGVKDSGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LIPGHGGLLDRVDGLMFAVVVMAVVRLANIWGWH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA