Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yfjG [C]

Identifier: 197105199

GI number: 197105199

Start: 1945627

End: 1946100

Strand: Reverse

Name: yfjG [C]

Synonym: PHZ_c1736

Alternate gene names: 197105199

Gene position: 1946100-1945627 (Counterclockwise)

Preceding gene: 197105200

Following gene: 197105197

Centisome position: 48.7

GC content: 67.72

Gene sequence:

>474_bases
TTGCGGCACCACGTCTCCAAGGCGCTGCCCTATACGCCCGACCAGCTCTTCCAGCTGGTGGGGGACGTCGATCGCTACCC
GGAGTTTGTACCCTGGGTCACGGCCCTGCGGACCTGGAACGCCCGCACGCTCAGCGAAGGCGTGGACAGCCTCGACGCCG
AGGCCGCCGTCGGTTTCTCGTTCCTGAAGGAGCGTTTCGCCACCCGCGTCCGCCGCGACACGCTGAACCGGCAGATCGAC
GTCAGCCTGCTGTCGGGCCCGTTCCGGAAGCTGGTGAACCGCTGGCGCTTCATCGATGCGGGCCACGGCTGCACGCGCGT
GGAGTTCGACATCGAGTTCCAGTTCAAGTCTCGCCTGCTGGAGGGCCTGCTGCGGGCGAACTTCCACCATGCGGTCGAGC
GGCTGATGGGCTGCTTCGAGGCCCGCGCGGAGGCCCTCTATGGCAAGGCGCAGCCCGAGATTTCGCCCGGCTGA

Upstream 100 bases:

>100_bases
GGTTTCGGCCAGCCCGCTCACCCGCTCGTCGCATCACGCCGGCGAGGACTTCGCCCGCCTGCAGGCCGCGCGCCTCGCCA
AGGAATCGGCGGCCTAGGGC

Downstream 100 bases:

>100_bases
ACCGCTGGCTACCGTGGCGAGCCCCTAGGCCAGCCGGTCCCTCAGCGCCTGAAGCGCCGCCTGCACCGCGGCCAGCTGGA
TCTCCTCGCGGGTCTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID
VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG

Sequences:

>Translated_157_residues
MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID
VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG
>Mature_157_residues
MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFSFLKERFATRVRRDTLNRQID
VSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLLEGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Escherichia coli, GI1788972, Length=140, Percent_Identity=30.7142857142857, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 18052; Mature: 18052

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFS
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FLKERFATRVRRDTLNRQIDVSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH
EGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRHHVSKALPYTPDQLFQLVGDVDRYPEFVPWVTALRTWNARTLSEGVDSLDAEAAVGFS
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FLKERFATRVRRDTLNRQIDVSLLSGPFRKLVNRWRFIDAGHGCTRVEFDIEFQFKSRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH
EGLLRANFHHAVERLMGCFEARAEALYGKAQPEISPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]