Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is bcp [C]

Identifier: 197105011

GI number: 197105011

Start: 1747396

End: 1747938

Strand: Reverse

Name: bcp [C]

Synonym: PHZ_c1548

Alternate gene names: 197105011

Gene position: 1747938-1747396 (Counterclockwise)

Preceding gene: 197105012

Following gene: 197105009

Centisome position: 43.74

GC content: 68.88

Gene sequence:

>543_bases
ATGCACCGCCTCGTCGCCGCCGCCGCGCTCTGCGCGGTGATCGCCACCCCCGCCGCAGCCGCCCTCAAGCCCGGGGACAA
GGCGCCGGACTTCACGGCCCAGGGCTACCAGGCGGGCAAGCCCCTCACCTTCTCGCTCGCCGAGGCGCGGAAGAAGGGGC
CGGTGGTGCTCTACTTCTTCCCGGCGGCCGACACGAAAGGCTGCAACATCGAGGCGAAGATGTTCGCCGACGCCATCCCG
CAGTTCCAGGCGGCGGGGGCGACCGTGATCGGCGTGACCGCCGGCAACCTCGACAAGCTGCAGCAGATCTCGTCCGACAC
CGACAAGTGCTCGGGCAAGTTCCCGGTGGCCGCCGATCCGGGGGCCAAGATCGCCAAGCAGTACGACGCCGTGCTGGCGA
TGAAGCCCGACTGGTCCGACCGGACGTCCTATGTGATCGCGCCCGGCGGCCAGGTGATCCACACCTATTCCAAGCTGGAC
CCGTCCGAGCACGTCTCCCAGACCCTCAGCGCCGTCAAAGGCTGGAAGGCGGCGAAGAAGTAG

Upstream 100 bases:

>100_bases
GCTGAACGTGGACGACTTCCTCTTCGCATAGCGGCGATCTAGCATCCGGACCGAAGGCTCCGCCGTATCCCTACGGCAGG
AGCCAAACCGGGAGATCCAC

Downstream 100 bases:

>100_bases
CCGCTCAGGAAGGGGTGGGCCGGGAGTCGGCGTCGCAGCCGAACCTGTCGCAGAGCCGGCGCAGGATCTCGCCCTGCGCC
GGCGGCATCAGCTCCTCCGT

Product: peroxiredoxin

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: Bacterioferritin Comigratory Protein; Redoxin Domain-Containing Protein; Thioredoxin Peroxidase; Peroxiredoxin Bacterioferritin Comigratory Protein; Antioxidant AhpC/TSA Family; Redoxin; Alkyl Hydroperoxide Reductase; Antioxidant AhpC/TSA Family Protein; Alkyl Hydroperoxide Reductase/ Thiol Specific; 2-Cys Peroxiredoxin; AhpC/TSA Family

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP
QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD
PSEHVSQTLSAVKGWKAAKK

Sequences:

>Translated_180_residues
MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP
QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD
PSEHVSQTLSAVKGWKAAKK
>Mature_180_residues
MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFFPAADTKGCNIEAKMFADAIP
QFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADPGAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLD
PSEHVSQTLSAVKGWKAAKK

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18822; Mature: 18822

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFF
CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEEE
PAADTKGCNIEAKMFADAIPQFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADP
CCCCCCCCCCHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHCCHHHCCCCCCCCCCC
GAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLDPSEHVSQTLSAVKGWKAAKK
CHHHHHHHCEEEEECCCCCCCCCEEECCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHRLVAAAALCAVIATPAAAALKPGDKAPDFTAQGYQAGKPLTFSLAEARKKGPVVLYFF
CCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEEEE
PAADTKGCNIEAKMFADAIPQFQAAGATVIGVTAGNLDKLQQISSDTDKCSGKFPVAADP
CCCCCCCCCCHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHCCHHHCCCCCCCCCCC
GAKIAKQYDAVLAMKPDWSDRTSYVIAPGGQVIHTYSKLDPSEHVSQTLSAVKGWKAAKK
CHHHHHHHCEEEEECCCCCCCCCEEECCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA