Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is ubiE [C]

Identifier: 197104816

GI number: 197104816

Start: 1531583

End: 1532428

Strand: Reverse

Name: ubiE [C]

Synonym: PHZ_c1350

Alternate gene names: 197104816

Gene position: 1532428-1531583 (Counterclockwise)

Preceding gene: 197104818

Following gene: 197104813

Centisome position: 38.35

GC content: 73.76

Gene sequence:

>846_bases
ATGTCAGCAACCGCCGCCCCGAACCGGGACCAGGCCGTCCTGTGGAACGAGGCCAACGGCCGCACGTGGGTCGAGCTGCA
GTCCGTGCTGGACCGGATGCTCGCGCCCTTCGCCAGCATCGTCGTGGACGAGGCCTTCCCGGGCGCTGGCGGGCGCGTCA
CCGACATCGGCTGCGGCGCGGGGGCGACCACCCTGGCCATGGCCCGAAGGCTGGGTCCGGGCGGCCTGGCGCTGGGCGTC
GACATCTCGGGGCCCCTGGTCGCCGCCGCAGCCGAACGCGCGAGGGCCGAGCGCCTGGAGAACGCCGCCTTCGTGCAGGC
CGACGCCCAGACCTACGCCTTCGACGAGGCGGGGTTCGACGCAGTGATGTCGCGGTTCGGGGTGATGTTCTTCGAGGACC
CGGAGGCCGCCTTCGCCAACATCCGGCGCGGCGTGCGGTCCGGCGGCAAGCTCGCCTTCGTGGCCTGGCGCAGTCCCGCC
GAGAACCCGTTCATGACCACGGCCATGCGCGCTGCTGCGCCGTTCCTGCCGCCCCTGCCGACGCCCGAGCCGGGCGCGCC
GGGCCAGTTCGGGTTCGCGGACGGCGAGCGCGTCCGGCGCATCCTCGAGGCCAGCGGGTGGACCGGGGTGGAGGTGCGGC
CCATCGACGTGCCCGCCTCGGTCGCCGAGGCGGACCTGAAGACCTACGTCGCCCGCATGGGCCCGGTAGGCGCGGCGATG
CGAGAGCTGCCCGAGGCGGACCGTGCGCGGATCGTCGAAGCGTTGCAGACGGCCTATGCGCCCTTCATCGAGGATGGAGA
GGCCCGCTTCACGGCCGCCTGCTGGCTGGTGACAGCGCGGGCCTAG

Upstream 100 bases:

>100_bases
CTGCGATGTCCAGTTCGGCCATGGGGGTTGACCTCAAGTCAGCTTGAACTTGCACACTGCGCCGCACGAACCCTCGAGGG
CAAGCCGAAGGAGCCTCCCA

Downstream 100 bases:

>100_bases
AGCGCCGGCTGCGTCGCGAGCGCCCTCGCCGCCTCGGCCGCGATCTCGAACGAGCGGACGCGGGCGGCGTGATCGTAGAT
CTGGGCCGTGACGATGATCT

Product: ubiquinone/menaquinone biosynthesis methyltransferase ubiE

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Methyltransferase UbiE/COQ5 Family; SAM-Dependent Methyltransferase; Methlytransferase UbiE/COQ5 Family Protein; Methyltransferase Protein; UbiE/COQ5 Family Methlytransferase; UbiE/COQ5 Methyltransferase; UbiE/COQ5 Family Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Aklanonic Acid Methyl Transferase; Methyltransferase Domain Family

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGV
DISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPA
ENPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM
RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA

Sequences:

>Translated_281_residues
MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGV
DISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPA
ENPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM
RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA
>Mature_280_residues
SATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGAGATTLAMARRLGPGGLALGVD
ISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFDAVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAE
NPFMTTAMRAAAPFLPPLPTPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAMR
ELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 29717; Mature: 29586

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGA
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GATTLAMARRLGPGGLALGVDISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFD
CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEECCHHEEECCCCHH
AVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAENPFMTTAMRAAAPFLPPLP
HHHHHHCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
TPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA
HHCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SATAAPNRDQAVLWNEANGRTWVELQSVLDRMLAPFASIVVDEAFPGAGGRVTDIGCGA
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GATTLAMARRLGPGGLALGVDISGPLVAAAAERARAERLENAAFVQADAQTYAFDEAGFD
CHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHEEEECCHHEEECCCCHH
AVMSRFGVMFFEDPEAAFANIRRGVRSGGKLAFVAWRSPAENPFMTTAMRAAAPFLPPLP
HHHHHHCEEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
TPEPGAPGQFGFADGERVRRILEASGWTGVEVRPIDVPASVAEADLKTYVARMGPVGAAM
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
RELPEADRARIVEALQTAYAPFIEDGEARFTAACWLVTARA
HHCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA