| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104741
Identifier: 197104741
GI number: 197104741
Start: 1451818
End: 1453131
Strand: Direct
Name: 197104741
Synonym: PHZ_c1275
Alternate gene names: NA
Gene position: 1451818-1453131 (Clockwise)
Preceding gene: 197104740
Following gene: 197104744
Centisome position: 36.33
GC content: 75.19
Gene sequence:
>1314_bases ATGCCCGACCGGTGGATGGACGAGCGCGAACGGCGCTGGCGTGACCGCAGCAACTGGCGCAGCGAGGCCTATGGCCGCGG CGGCGAGGGCGAGCGGCAGACCCGGATCTGGGGCGAGGACCGCACCTGGGGCGGCCCGGCCGACGACGACTACGGCCCGG GGCGCGGCGCCCGCTTCGAAGGCCGCGACCGCGACCGGGTGTTCGGCGAGGAGGATTCCGGCGTCGCCTACAACCGCCCG AACGTGCGTCCCGGCGGAGGCGCGTACGGCGCCGGCGGCGGCTATGGCGGCGGCGAGAGCTACGGGCGCGGCGCGGGCGG CGGCCGCGACTGGCGCGACGAACGTGGCGGCCGCCAGGCCCGCCAGGATCGACCCGCCTGGCAGGACCGCGACTACGGCG GGGTGAGCCCGGCCATGGAGCACGACGAGTACGACGCCGAGCGTGACCGCGAACGCGGCCTGCGCTTCGGGCGGCAGGAC TACACGCGCGGCGGCCGCTTCTACGGCGACGACCGCCGCCAGCCGATCTACCGCGAGGAGTGGGGCCAGGGCGCGCCCGA GTACGGCCCGGCTCCGCGCGGCTACGACGCCGGCCGCGAGCGCGGCGGATACGGCTCCGCCTACGGCAACCGCGAGCTCG AGAGCCGCTACGCCCGCGAGATGGGCGGGCGCATGGCTTCGGGGGGCGTCGGCGGCTACGACTTCGAGCGCGGCTACGGC GACGGCGGCCGCGAGCAGGAGCGCGGCGGCTGGGACCGCGACCGCGAGGCCGGGCGGGACCGCTCGGGCGGCGGCTTCTT CCAGAAGGTGACCAGCTGGTTCGGCGACGCCGTCGACGAGGTCCGGCGCGATCTGTCGGGCGAGCGGAGCGGCCAGCGCT ACGGCGCCGACTACGGCCGGGAGGCCCGCCGGGAGGCCCCTTGGGAAGATCGCGGCCACCGCGGCCGGGGCCCGAAGGAC TACAAGCGCTCGGACGAGCGGATCAGCGACGAGGCCCACGATCGCCTGACCGACGATCCCTGGCTGGACGCCTCGAACAT CAACGTCTCGGTGTCGGGCGGAGAGGTGACGCTCTCGGGGACCGTCGAGACGCGCGAGGCCAAGCATCGGGCCGAGCGCC TCGTCGAGGACATCTCCGGCGTCAGCCACGTGCAGAACAACCTGCGCATCGACCAGGGCGGGTTCTTCACCAGCCCCGGC AAGGGCTATGGCGACAGCGTCATGGACGCCCAGATGCGGGACGAGGGCGCGACGGCGGGCGGCAAGTCCGGCGAGGATGC AGCCTCCACCCGCAGCACCACCCGGCGGACCTGA
Upstream 100 bases:
>100_bases CAACATTCCGCTCTGAGACGCGGAACGACCGTCGCCGTCCCTTGTTCTGCCAATGAGGCGGGCGCGCGCCCGCAGGCCCT GCAGAACAGGAGGATTCCCC
Downstream 100 bases:
>100_bases GCCCGCCGGCGGTCAGTAGGCGAACGCCCGGTAGGTTTCGGCCGGCCGGGCGGCCTCGGCCTTGGTCTCGAACACGGGAT TGTGCCGCAGCCAGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Osmotically Inducible Sensory Protein; Pe_pgrs; Osmotic Sensory Protein
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPDRWMDERERRWRDRSNWRSEAYGRGGEGERQTRIWGEDRTWGGPADDDYGPGRGARFEGRDRDRVFGEEDSGVAYNRP NVRPGGGAYGAGGGYGGGESYGRGAGGGRDWRDERGGRQARQDRPAWQDRDYGGVSPAMEHDEYDAERDRERGLRFGRQD YTRGGRFYGDDRRQPIYREEWGQGAPEYGPAPRGYDAGRERGGYGSAYGNRELESRYAREMGGRMASGGVGGYDFERGYG DGGREQERGGWDRDREAGRDRSGGGFFQKVTSWFGDAVDEVRRDLSGERSGQRYGADYGREARREAPWEDRGHRGRGPKD YKRSDERISDEAHDRLTDDPWLDASNINVSVSGGEVTLSGTVETREAKHRAERLVEDISGVSHVQNNLRIDQGGFFTSPG KGYGDSVMDAQMRDEGATAGGKSGEDAASTRSTTRRT
Sequences:
>Translated_437_residues MPDRWMDERERRWRDRSNWRSEAYGRGGEGERQTRIWGEDRTWGGPADDDYGPGRGARFEGRDRDRVFGEEDSGVAYNRP NVRPGGGAYGAGGGYGGGESYGRGAGGGRDWRDERGGRQARQDRPAWQDRDYGGVSPAMEHDEYDAERDRERGLRFGRQD YTRGGRFYGDDRRQPIYREEWGQGAPEYGPAPRGYDAGRERGGYGSAYGNRELESRYAREMGGRMASGGVGGYDFERGYG DGGREQERGGWDRDREAGRDRSGGGFFQKVTSWFGDAVDEVRRDLSGERSGQRYGADYGREARREAPWEDRGHRGRGPKD YKRSDERISDEAHDRLTDDPWLDASNINVSVSGGEVTLSGTVETREAKHRAERLVEDISGVSHVQNNLRIDQGGFFTSPG KGYGDSVMDAQMRDEGATAGGKSGEDAASTRSTTRRT >Mature_436_residues PDRWMDERERRWRDRSNWRSEAYGRGGEGERQTRIWGEDRTWGGPADDDYGPGRGARFEGRDRDRVFGEEDSGVAYNRPN VRPGGGAYGAGGGYGGGESYGRGAGGGRDWRDERGGRQARQDRPAWQDRDYGGVSPAMEHDEYDAERDRERGLRFGRQDY TRGGRFYGDDRRQPIYREEWGQGAPEYGPAPRGYDAGRERGGYGSAYGNRELESRYAREMGGRMASGGVGGYDFERGYGD GGREQERGGWDRDREAGRDRSGGGFFQKVTSWFGDAVDEVRRDLSGERSGQRYGADYGREARREAPWEDRGHRGRGPKDY KRSDERISDEAHDRLTDDPWLDASNINVSVSGGEVTLSGTVETREAKHRAERLVEDISGVSHVQNNLRIDQGGFFTSPGK GYGDSVMDAQMRDEGATAGGKSGEDAASTRSTTRRT
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48858; Mature: 48726
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRWMDERERRWRDRSNWRSEAYGRGGEGERQTRIWGEDRTWGGPADDDYGPGRGARFE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC GRDRDRVFGEEDSGVAYNRPNVRPGGGAYGAGGGYGGGESYGRGAGGGRDWRDERGGRQA CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHH RQDRPAWQDRDYGGVSPAMEHDEYDAERDRERGLRFGRQDYTRGGRFYGDDRRQPIYREE HHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHH WGQGAPEYGPAPRGYDAGRERGGYGSAYGNRELESRYAREMGGRMASGGVGGYDFERGYG HCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCC DGGREQERGGWDRDREAGRDRSGGGFFQKVTSWFGDAVDEVRRDLSGERSGQRYGADYGR CCCCCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH EARREAPWEDRGHRGRGPKDYKRSDERISDEAHDRLTDDPWLDASNINVSVSGGEVTLSG HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEC TVETREAKHRAERLVEDISGVSHVQNNLRIDQGGFFTSPGKGYGDSVMDAQMRDEGATAG CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEECCCCCCCCCHHHHHHHHHCCCCCC GKSGEDAASTRSTTRRT CCCCCHHHHHHHHHCCC >Mature Secondary Structure PDRWMDERERRWRDRSNWRSEAYGRGGEGERQTRIWGEDRTWGGPADDDYGPGRGARFE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC GRDRDRVFGEEDSGVAYNRPNVRPGGGAYGAGGGYGGGESYGRGAGGGRDWRDERGGRQA CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHH RQDRPAWQDRDYGGVSPAMEHDEYDAERDRERGLRFGRQDYTRGGRFYGDDRRQPIYREE HHCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHH WGQGAPEYGPAPRGYDAGRERGGYGSAYGNRELESRYAREMGGRMASGGVGGYDFERGYG HCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCC DGGREQERGGWDRDREAGRDRSGGGFFQKVTSWFGDAVDEVRRDLSGERSGQRYGADYGR CCCCCHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH EARREAPWEDRGHRGRGPKDYKRSDERISDEAHDRLTDDPWLDASNINVSVSGGEVTLSG HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEC TVETREAKHRAERLVEDISGVSHVQNNLRIDQGGFFTSPGKGYGDSVMDAQMRDEGATAG CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEECCCCCCCCCHHHHHHHHHCCCCCC GKSGEDAASTRSTTRRT CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA