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The map label for this gene is 197104604

Identifier: 197104604

GI number: 197104604

Start: 1304021

End: 1304527

Strand: Direct

Name: 197104604

Synonym: PHZ_c1138

Alternate gene names: NA

Gene position: 1304021-1304527 (Clockwise)

Preceding gene: 197104603

Following gene: 197104605

Centisome position: 32.63

GC content: 71.79

Gene sequence:

>507_bases
ATGGCGATCGGGAAGAGCAGGGGCGCGGTCGCGGCGATCGCCCTGGGAATCGGCGCGGCGGTGGCCGCGACGGGGGCCTT
CGCCCACAACGAGCCCATGCCGAAGGGGCCGATGAGCGCGGGCGCGCGGGCGGCCCACCAGCGCCACGCCAATTTCGAGA
AGCTGGGCGCGGCCTTCAAGGCGCTGAACGACGAGCTGCGCAAGGGCAATCCGAACGCGGCGACCGTACAGGCCCAGACC
AAGACCATGGCCAGCCTCGCCACCGCCCTGCCGACCTGGTTCCCGCGCGGGAGCGGCGTCGAGGCGCGGCCGAAGAGCGA
GGCCAAGGCCAACATCTGGACCGACGCCGCGGGCTTCTCCGCGGTCGCGTCGGCGATGCAGGTGCAGGTCTCCAAGCTGA
ACCAGGCCGCCCTCAGCGGCGACATGGACGCCGTGAAGGCCCAGGTGCGGCCTACCGGGGCGTCCTGCAAGGCCTGCCAC
GACAAGTACCGCCAGCAGAAGGACTGA

Upstream 100 bases:

>100_bases
CCGGCCGCGAGGGCGCGCCGGTGAAGTCCGCGAGCCGTTGACGGCCAAGGCCGGGCCCCGGCAATCTCCCGCGCTGGCAG
GGTTTCAGAAGGCGAGCTTC

Downstream 100 bases:

>100_bases
GGCCTTGGCGTCCCCCGAGGCCGGCGTGCGGGCGAAGCTCTGGGACGCGCCCGTCCGCATCGTCCACTGGCTGCTGGTGG
TGCTGGTCGCCTTCTCCTGG

Product: putative cytochrome c signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAIGKSRGAVAAIALGIGAAVAATGAFAHNEPMPKGPMSAGARAAHQRHANFEKLGAAFKALNDELRKGNPNAATVQAQT
KTMASLATALPTWFPRGSGVEARPKSEAKANIWTDAAGFSAVASAMQVQVSKLNQAALSGDMDAVKAQVRPTGASCKACH
DKYRQQKD

Sequences:

>Translated_168_residues
MAIGKSRGAVAAIALGIGAAVAATGAFAHNEPMPKGPMSAGARAAHQRHANFEKLGAAFKALNDELRKGNPNAATVQAQT
KTMASLATALPTWFPRGSGVEARPKSEAKANIWTDAAGFSAVASAMQVQVSKLNQAALSGDMDAVKAQVRPTGASCKACH
DKYRQQKD
>Mature_167_residues
AIGKSRGAVAAIALGIGAAVAATGAFAHNEPMPKGPMSAGARAAHQRHANFEKLGAAFKALNDELRKGNPNAATVQAQTK
TMASLATALPTWFPRGSGVEARPKSEAKANIWTDAAGFSAVASAMQVQVSKLNQAALSGDMDAVKAQVRPTGASCKACHD
KYRQQKD

Specific function: Cytochrome c' is the most widely occurring bacterial c- type cytochrome. Cytochromes c' are high-spin proteins and the heme has no sixth ligand. Their exact function is not known [H]

COG id: COG3909

COG function: function code C; Cytochrome c556

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010980
- InterPro:   IPR002321
- InterPro:   IPR012127
- InterPro:   IPR015984 [H]

Pfam domain/function: PF01322 Cytochrom_C_2 [H]

EC number: NA

Molecular weight: Translated: 17313; Mature: 17182

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGKSRGAVAAIALGIGAAVAATGAFAHNEPMPKGPMSAGARAAHQRHANFEKLGAAFK
CCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
ALNDELRKGNPNAATVQAQTKTMASLATALPTWFPRGSGVEARPKSEAKANIWTDAAGFS
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHH
AVASAMQVQVSKLNQAALSGDMDAVKAQVRPTGASCKACHDKYRQQKD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AIGKSRGAVAAIALGIGAAVAATGAFAHNEPMPKGPMSAGARAAHQRHANFEKLGAAFK
CCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
ALNDELRKGNPNAATVQAQTKTMASLATALPTWFPRGSGVEARPKSEAKANIWTDAAGFS
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHH
AVASAMQVQVSKLNQAALSGDMDAVKAQVRPTGASCKACHDKYRQQKD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4360249; 11060017; 11300792 [H]