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The map label for this gene is 197104605

Identifier: 197104605

GI number: 197104605

Start: 1304532

End: 1305203

Strand: Direct

Name: 197104605

Synonym: PHZ_c1139

Alternate gene names: NA

Gene position: 1304532-1305203 (Clockwise)

Preceding gene: 197104604

Following gene: 197104606

Centisome position: 32.64

GC content: 72.62

Gene sequence:

>672_bases
TTGGCGTCCCCCGAGGCCGGCGTGCGGGCGAAGCTCTGGGACGCGCCCGTCCGCATCGTCCACTGGCTGCTGGTGGTGCT
GGTCGCCTTCTCCTGGTGGTCGTCCGAGGACCACCTGAACTGGCACCGGTGGAGCGGCTACGCGATCCTCGGGCTGGTGC
TGTTCCGCATCTACTGGGGTTTCGCCGGCGGCGGGGCGGCGCGCTTCGCCAGCTTCGTGAAGGGGCCCGGCGCCGTGCTC
GCCTACGCTCGGGGCCTGCCACAGCGGGCGGCGGCCGCCGTGCCGGGGCACAACCCCCTCGGCGGCTGGAGCGTGATCGC
CATCCTGGCCGTGCTGGCCGTGCAGGTGACGACGGGGCTGTTCGCGGTGGACGTGGACGCCTTCGAGGCGGGACCCATGT
CGGACCGGGTCAGCTTCGAGACCGGGCGGGCCATCGCCGAGGTCCACGAGCTGAGCTTCCGCGCGCTGCAGGCGCTGCTC
GTCCTGCACGTCGCCGCGGTGCTGTTCTACCTCTTCTACAAGCGCACGAACCTGATCCGGCCGATGGTCACCGGCTGGCG
GACGTTTCCGCAGGACCCGGGCCTTGCGGGGGCGCCGGCGTGGCGGCTGGTCGTGGGCGTCGTCCTCGCCGCCGCCATCG
CCTGGTTCGTGTCGAAGGGCCTGCGGCTCTAG

Upstream 100 bases:

>100_bases
CTCAGCGGCGACATGGACGCCGTGAAGGCCCAGGTGCGGCCTACCGGGGCGTCCTGCAAGGCCTGCCACGACAAGTACCG
CCAGCAGAAGGACTGAGGCC

Downstream 100 bases:

>100_bases
CCCCGATCAGCCGCGTCGCGCAGGCAGGTCAGCCAGGCGTCCTCGCGCGCCTTCTCGGCCTCGCGCAGCTTGGACTCGGC
CTCGCGGACCGCCGCGTCGT

Product: Ni/Fe-hydrogenase 1 b-type cytochrome subunit

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MASPEAGVRAKLWDAPVRIVHWLLVVLVAFSWWSSEDHLNWHRWSGYAILGLVLFRIYWGFAGGGAARFASFVKGPGAVL
AYARGLPQRAAAAVPGHNPLGGWSVIAILAVLAVQVTTGLFAVDVDAFEAGPMSDRVSFETGRAIAEVHELSFRALQALL
VLHVAAVLFYLFYKRTNLIRPMVTGWRTFPQDPGLAGAPAWRLVVGVVLAAAIAWFVSKGLRL

Sequences:

>Translated_223_residues
MASPEAGVRAKLWDAPVRIVHWLLVVLVAFSWWSSEDHLNWHRWSGYAILGLVLFRIYWGFAGGGAARFASFVKGPGAVL
AYARGLPQRAAAAVPGHNPLGGWSVIAILAVLAVQVTTGLFAVDVDAFEAGPMSDRVSFETGRAIAEVHELSFRALQALL
VLHVAAVLFYLFYKRTNLIRPMVTGWRTFPQDPGLAGAPAWRLVVGVVLAAAIAWFVSKGLRL
>Mature_222_residues
ASPEAGVRAKLWDAPVRIVHWLLVVLVAFSWWSSEDHLNWHRWSGYAILGLVLFRIYWGFAGGGAARFASFVKGPGAVLA
YARGLPQRAAAAVPGHNPLGGWSVIAILAVLAVQVTTGLFAVDVDAFEAGPMSDRVSFETGRAIAEVHELSFRALQALLV
LHVAAVLFYLFYKRTNLIRPMVTGWRTFPQDPGLAGAPAWRLVVGVVLAAAIAWFVSKGLRL

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24215; Mature: 24083

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPEAGVRAKLWDAPVRIVHWLLVVLVAFSWWSSEDHLNWHRWSGYAILGLVLFRIYWG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHC
FAGGGAARFASFVKGPGAVLAYARGLPQRAAAAVPGHNPLGGWSVIAILAVLAVQVTTGL
CCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FAVDVDAFEAGPMSDRVSFETGRAIAEVHELSFRALQALLVLHVAAVLFYLFYKRTNLIR
HEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMVTGWRTFPQDPGLAGAPAWRLVVGVVLAAAIAWFVSKGLRL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASPEAGVRAKLWDAPVRIVHWLLVVLVAFSWWSSEDHLNWHRWSGYAILGLVLFRIYWG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHC
FAGGGAARFASFVKGPGAVLAYARGLPQRAAAAVPGHNPLGGWSVIAILAVLAVQVTTGL
CCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FAVDVDAFEAGPMSDRVSFETGRAIAEVHELSFRALQALLVLHVAAVLFYLFYKRTNLIR
HEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PMVTGWRTFPQDPGLAGAPAWRLVVGVVLAAAIAWFVSKGLRL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA