Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yhjG [H]

Identifier: 197104603

GI number: 197104603

Start: 1302057

End: 1303961

Strand: Direct

Name: yhjG [H]

Synonym: PHZ_c1137

Alternate gene names: 197104603

Gene position: 1302057-1303961 (Clockwise)

Preceding gene: 197104602

Following gene: 197104604

Centisome position: 32.58

GC content: 72.34

Gene sequence:

>1905_bases
GTGCTCGTGGCCATCTGGGACTGGAACTGGTTCAGAGGGCCGGTCGAGCGGATCGCCTCGGCCCGGCTGAACCGCGAGGT
CAGCATCGCGGGCGACCTCGACGTGCGGCTTTGGTCGTGGCAGCCCCGGGCGACCGTAGAAGGCGTGCGGATCGCCAATG
CGCCGTGGGCGGGCCGCGACCCGCTCGGGACCTTCGAGAAGATCACCGTGCAGATCCGGCTGGTCCCGCTGCTGTGGGGG
AACGTCGACCTGCGCCTGCTGCGGTTCGACCGTCCCGAACTGCGGCTCTACGCGGACGCCCGGGGCCGCCGGAACTGGGA
TTTCTCGGACGGCCGCAAGAAGGAGCCCATGCGGCTGCCGCCGATCCGCAGCTTCATCGTCGCCGACGGCCGGATGTCGT
ACCTCGACGTGAAGCGCGACCTGCGCTTTGAGGGGACGATCAACGCCGCCGAGACCCTGGGCGACCGGAGCCGCGGCTTC
GAGCTGGTCGGCCAGGGCACGATCAACCGCCAGCCGTTCCGGATGGAGGTCACCGGCGGGCCGCTGGTGAACATCGAGCG
CGACAGGCCCTATCCGTTCAACGCCGAGATCCGGGCCGGCCGGACGTACATCACGGCCAACGGGGCGGTGCCCAAGCCCT
TCGACCTCGGCCGCTTCCACATGTTCACGACCGCGCGCGGGCCGGACCTGTCGGACCTCTATCCGCTGACGGGCGTCGCC
CTGCCGAACACCCCGCCCTACAGCCTGCGCGGCCGCCTCTCGCGCGACGAGCTGGTCTGGCGCATCGACAACCTCGGCGG
CCGGGTGGGCGACAGCGACCTCGCCGGCGACATCAAGGTCGAGACCGGCCGGACGCGGCCGATGTTCGAGGCCGACCTGC
GCTCGCGCAGCCTGGACTTCGACGACCTGGGCGCGCTGTTCGGCGGCGCGCCGGCGACGGGTCCCGGCGAGACGGCCTCG
GCCGAGCAGGTGGCGGTCGCCCGCGCGCTGAACGCCCAGCAGCGGATCTTCCCGGATTCCACCCTCGACGTGAGCCGCAT
CCGGGCGATGGACGCCGACGTCCGCTACCGGGCCCAGTCGATCCGCGACGCGCCCGTGAACCTCACCGCCGGCCAGGTGC
GGGTGAAGCTGGACAACGGCCTCCTGCGGGCCGAGCCGCTGGTGCTGGACCTGCCGCAGGGCCGGGTGAGCGGCTTCGTG
GCCCTGAACGCCCGCCGGGAGGTCCCCGTCACCGAACTGGACCTGCGGCTGGCCAACGCGCGGATCGAGCAGCTCATCCC
GGTCACCTATGAGGGCGGCCATCCCCTCACCGGAGCCGTCTCCGGCCGCGCCCGGCTGACCGGCGCGGGGGACAGCATCC
ACAAGGCGTTCGCGAGCGCCGACGGCGAGGTGATGGTGGTCGCCCCCGGCGGCGAGATCCGCAAGGCCTTCGCCGAGCTG
ATGGGCGTGAATGTCGTGAAGGGCCTTGGCCTGCTGCTCAGCAAGGACGACGACACGACCGCGCTGCGCTGCGGGGTCGC
CCACTTCCGCACGACCGACGGCGTCATGCGCGCCGGCAACATCGTGGTCGACACCGGCCCGGTGCTGATCACCGGCAAGG
GCGCGATCAACCTGGGCACGGAGCGGATGTCCTTCGAGGTCCGCGGCCATAACAAGAAGTTCCGGCTGGTCCGCGCGCTG
ATCCCGGTGAAGGCCGAGGGGCCGATCCGGGCGCCGAAGCTGGGCCTGGAGCCCGGTGGGGCGATCGCGCAGGGCGCCGC
CGGCGTCGGCCTCGGCGCGCTGCTCAACCCGATCGCGGCGCTGCTGCCGTTCGTCGATCCGGGCCTCGCCAAGGACGCCA
ACTGCGGCGCGATGCTGGCCCAGGCCGGCCGCGAGGGCGCGCCGGTGAAGTCCGCGAGCCGTTGA

Upstream 100 bases:

>100_bases
CCGCAACACGCGCCTGCCGCCGCCCCGGCTGAGGAAGCCCAGCCGCAAGGCCCTGTACTGGACCGGCGGCGTCCTGGCCG
CGCTGGCGGTCGCCATCGGG

Downstream 100 bases:

>100_bases
CGGCCAAGGCCGGGCCCCGGCAATCTCCCGCGCTGGCAGGGTTTCAGAAGGCGAGCTTCATGGCGATCGGGAAGAGCAGG
GGCGCGGTCGCGGCGATCGC

Product: AsmA family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRDPLGTFEKITVQIRLVPLLWG
NVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLPPIRSFIVADGRMSYLDVKRDLRFEGTINAAETLGDRSRGF
ELVGQGTINRQPFRMEVTGGPLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPDLSDLYPLTGVA
LPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSDLAGDIKVETGRTRPMFEADLRSRSLDFDDLGALFGGAPATGPGETAS
AEQVAVARALNAQQRIFPDSTLDVSRIRAMDADVRYRAQSIRDAPVNLTAGQVRVKLDNGLLRAEPLVLDLPQGRVSGFV
ALNARREVPVTELDLRLANARIEQLIPVTYEGGHPLTGAVSGRARLTGAGDSIHKAFASADGEVMVVAPGGEIRKAFAEL
MGVNVVKGLGLLLSKDDDTTALRCGVAHFRTTDGVMRAGNIVVDTGPVLITGKGAINLGTERMSFEVRGHNKKFRLVRAL
IPVKAEGPIRAPKLGLEPGGAIAQGAAGVGLGALLNPIAALLPFVDPGLAKDANCGAMLAQAGREGAPVKSASR

Sequences:

>Translated_634_residues
MLVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRDPLGTFEKITVQIRLVPLLWG
NVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLPPIRSFIVADGRMSYLDVKRDLRFEGTINAAETLGDRSRGF
ELVGQGTINRQPFRMEVTGGPLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPDLSDLYPLTGVA
LPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSDLAGDIKVETGRTRPMFEADLRSRSLDFDDLGALFGGAPATGPGETAS
AEQVAVARALNAQQRIFPDSTLDVSRIRAMDADVRYRAQSIRDAPVNLTAGQVRVKLDNGLLRAEPLVLDLPQGRVSGFV
ALNARREVPVTELDLRLANARIEQLIPVTYEGGHPLTGAVSGRARLTGAGDSIHKAFASADGEVMVVAPGGEIRKAFAEL
MGVNVVKGLGLLLSKDDDTTALRCGVAHFRTTDGVMRAGNIVVDTGPVLITGKGAINLGTERMSFEVRGHNKKFRLVRAL
IPVKAEGPIRAPKLGLEPGGAIAQGAAGVGLGALLNPIAALLPFVDPGLAKDANCGAMLAQAGREGAPVKSASR
>Mature_634_residues
MLVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRDPLGTFEKITVQIRLVPLLWG
NVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLPPIRSFIVADGRMSYLDVKRDLRFEGTINAAETLGDRSRGF
ELVGQGTINRQPFRMEVTGGPLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPDLSDLYPLTGVA
LPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSDLAGDIKVETGRTRPMFEADLRSRSLDFDDLGALFGGAPATGPGETAS
AEQVAVARALNAQQRIFPDSTLDVSRIRAMDADVRYRAQSIRDAPVNLTAGQVRVKLDNGLLRAEPLVLDLPQGRVSGFV
ALNARREVPVTELDLRLANARIEQLIPVTYEGGHPLTGAVSGRARLTGAGDSIHKAFASADGEVMVVAPGGEIRKAFAEL
MGVNVVKGLGLLLSKDDDTTALRCGVAHFRTTDGVMRAGNIVVDTGPVLITGKGAINLGTERMSFEVRGHNKKFRLVRAL
IPVKAEGPIRAPKLGLEPGGAIAQGAAGVGLGALLNPIAALLPFVDPGLAKDANCGAMLAQAGREGAPVKSASR

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510981, Length=668, Percent_Identity=26.0479041916168, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 68775; Mature: 68775

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRD
CEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCC
PLGTFEKITVQIRLVPLLWGNVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLP
CCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
PIRSFIVADGRMSYLDVKRDLRFEGTINAAETLGDRSRGFELVGQGTINRQPFRMEVTGG
CCCEEEEECCCEEEEEHHHCCEEECCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCC
PLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPDLSDLYPLTGVA
CEEEEECCCCCCCCCEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCEEE
LPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSDLAGDIKVETGRTRPMFEADLRSRSLDF
CCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCH
DDLGALFGGAPATGPGETASAEQVAVARALNAQQRIFPDSTLDVSRIRAMDADVRYRAQS
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
IRDAPVNLTAGQVRVKLDNGLLRAEPLVLDLPQGRVSGFVALNARREVPVTELDLRLANA
CCCCCCEEECCEEEEEECCCEEEECCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHH
RIEQLIPVTYEGGHPLTGAVSGRARLTGAGDSIHKAFASADGEVMVVAPGGEIRKAFAEL
HHHHCCEEEECCCCCEEEECCCCEEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
MGVNVVKGLGLLLSKDDDTTALRCGVAHFRTTDGVMRAGNIVVDTGPVLITGKGAINLGT
HCCHHHHCCCEEEECCCCCCEEEECHHHEECCCCCEECCCEEEECCCEEEECCCCEEECC
ERMSFEVRGHNKKFRLVRALIPVKAEGPIRAPKLGLEPGGAIAQGAAGVGLGALLNPIAA
EEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
LLPFVDPGLAKDANCGAMLAQAGREGAPVKSASR
HHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLVAIWDWNWFRGPVERIASARLNREVSIAGDLDVRLWSWQPRATVEGVRIANAPWAGRD
CEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCC
PLGTFEKITVQIRLVPLLWGNVDLRLLRFDRPELRLYADARGRRNWDFSDGRKKEPMRLP
CCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
PIRSFIVADGRMSYLDVKRDLRFEGTINAAETLGDRSRGFELVGQGTINRQPFRMEVTGG
CCCEEEEECCCEEEEEHHHCCEEECCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEECCC
PLVNIERDRPYPFNAEIRAGRTYITANGAVPKPFDLGRFHMFTTARGPDLSDLYPLTGVA
CEEEEECCCCCCCCCEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCEEE
LPNTPPYSLRGRLSRDELVWRIDNLGGRVGDSDLAGDIKVETGRTRPMFEADLRSRSLDF
CCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCH
DDLGALFGGAPATGPGETASAEQVAVARALNAQQRIFPDSTLDVSRIRAMDADVRYRAQS
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHHCCCCHHHHHHH
IRDAPVNLTAGQVRVKLDNGLLRAEPLVLDLPQGRVSGFVALNARREVPVTELDLRLANA
CCCCCCEEECCEEEEEECCCEEEECCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHH
RIEQLIPVTYEGGHPLTGAVSGRARLTGAGDSIHKAFASADGEVMVVAPGGEIRKAFAEL
HHHHCCEEEECCCCCEEEECCCCEEEECCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
MGVNVVKGLGLLLSKDDDTTALRCGVAHFRTTDGVMRAGNIVVDTGPVLITGKGAINLGT
HCCHHHHCCCEEEECCCCCCEEEECHHHEECCCCCEECCCEEEECCCEEEECCCCEEECC
ERMSFEVRGHNKKFRLVRALIPVKAEGPIRAPKLGLEPGGAIAQGAAGVGLGALLNPIAA
EEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHH
LLPFVDPGLAKDANCGAMLAQAGREGAPVKSASR
HHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]