Click here to switch to the map view.

The map label for this gene is wcaJ [H]

Identifier: 197104602

GI number: 197104602

Start: 1301211

End: 1301774

Strand: Direct

Name: wcaJ [H]

Synonym: PHZ_c1136

Alternate gene names: 197104602

Gene position: 1301211-1301774 (Clockwise)

Preceding gene: 197104601

Following gene: 197104603

Centisome position: 32.56

GC content: 72.16

Gene sequence:

>564_bases
GTGCTGAAGCGGGCCTTCGACATCGCTGCGTCCCTCGCCGGGCTGGTCGCGCTTTCGCCGGTGCTGCTGGCGATCGCGGC
GGCGGTGCGCCTGGACAGCCCCGGGCCCGCCGTCCACTGGTCGCGGCGCGTGGGACGCAACAACCGCGTCTTCCGGATGC
CGAAGTTCCGCACCATGCGGATCGACACGCCGGACGTGGCCACGCACCTGCTGGACCGTCCCGAGCAGTGGATCACGCCG
CTGGGCCGCTTTCTGCGCCGCACCAGCCTGGACGAGCTGCCGCAGCTGTGGAGCGTGCTGACGGGCGAGATGAGCCTGGT
GGGTCCCAGGCCGGCGCTGTTCAACCAGGACGATCTCGTCGCCCTGCGCACCGAGGCCGGGGTGGAGCGGCTGCGGCCCG
GCGTCACCGGCTGGGCCCAGATCAACGGCCGCGACGAGCTGCCCATCCCCGAGAAGGTGCGGCTGGACCGCGAGTACCTG
GAGCGGATGTCGCTCGCCTTCGACCTCCGGATCCTCGTCGCGACGGTGCTGGCCGCGTTCAGCGGGCGGGGCGTAAGCCA
CTAG

Upstream 100 bases:

>100_bases
CTCCAAAGGCGAAGCGCGCCGCTCCGGACGCCGACCCGGCTTCGGCCTGACGACCTGGCCTGACTTGGCGCTCCCGCCCG
GCGCGCTCTAGAAGGGCGGG

Downstream 100 bases:

>100_bases
ACACGCTCGGGAACTCTCCTCCGCAGGCTGCGCTTTTGATGGGGTCCCGGAGACCCCCGCGTGAGCAACGAAGCCTTCCA
GAACCCCGAGCCCGGCCGGC

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMRIDTPDVATHLLDRPEQWITP
LGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLVALRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYL
ERMSLAFDLRILVATVLAAFSGRGVSH

Sequences:

>Translated_187_residues
MLKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMRIDTPDVATHLLDRPEQWITP
LGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLVALRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYL
ERMSLAFDLRILVATVLAAFSGRGVSH
>Mature_187_residues
MLKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMRIDTPDVATHLLDRPEQWITP
LGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLVALRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYL
ERMSLAFDLRILVATVLAAFSGRGVSH

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=190, Percent_Identity=41.0526315789474, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 20910; Mature: 20910

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCEEEE
IDTPDVATHLLDRPEQWITPLGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLV
ECCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEE
ALRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYLERMSLAFDLRILVATVLAAF
EEHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SGRGVSH
CCCCCCC
>Mature Secondary Structure
MLKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCEEEE
IDTPDVATHLLDRPEQWITPLGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLV
ECCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEE
ALRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYLERMSLAFDLRILVATVLAAF
EEHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
SGRGVSH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]