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The map label for this gene is yhiR [C]

Identifier: 197104601

GI number: 197104601

Start: 1299818

End: 1300645

Strand: Direct

Name: yhiR [C]

Synonym: PHZ_c1135

Alternate gene names: 197104601

Gene position: 1299818-1300645 (Clockwise)

Preceding gene: 197104598

Following gene: 197104602

Centisome position: 32.53

GC content: 72.46

Gene sequence:

>828_bases
TTGAACTACCGCCACGCCTTCCATGCCGGGAACTTCGCCGACCTGGTGAAGCACGCCGCCCTCCTGCGCCTGCTGGCGCG
CCTGATGGAGGACGGGCGGCCGCTGACGGTGATCGACACCCACGCCGGCCGGGGCCTCTACGATCTGGCGGGGGAGGAGG
CGCGCAAATCGGGCGAGGCCGAGGCGGGGATCGTGCGGCTGATGGGAGCGAAGGATGCGCCGGCCGCCTTCCGGCCTCTC
GTGCAGGCGGTCGCGGCGCTGAACGGCGGCGGGCCCGTGCGACGCTATCCCGGTTCGCCCTGGCTGATCGCCCAGGCGCT
GCGACCCGCCGACCGCTACCTGGCCTGCGAGCTGCGCAAGGAGGAGCACGACGCACTGCGCAGCGCGCTGAAGGGGCGGG
CGAACGTCGAGACCCTCTGCACCGACGGCTACCGGGCGGCCGTCGAGCGCTGCCCGCCGCGAGGCCGTGCGCTGCTGCTG
ATCGATCCGCCGTTCGAGAAACCCGACGACTACGGCCGGATCGTCGAGACGCTGGAGGGCGCCCGGGCGAGCAACCCGGC
CGTCCAGGCGCTCGTCTGGCTGCCGCTCAAGGACCTGGAGACCTTCGACGCCTTCCTGCGGGATCTGGAGGACGCCGGCC
TGCCGCCGGCGCTGGTCTGCGAGGCGCGCATCCGCCCCCTGGCCGATCCCATGAAGATGAACGGCTGCGCCCTGGTGCTG
TGGAACGGGCCCGACTTGGCGACCGATCTTGCCGACATCTGCGGCTGGGTCGCCCAGGCCTTGGGCGACGGCGGCGCGTC
GCGGGTCTATCGGCTGCCGTCATCGTAA

Upstream 100 bases:

>100_bases
GGCGCTCCCCGCGTGGCTCACCGGGGCCCTGGGCCCTCCACGCGCCCCGCGGCAACGTGGTATGCGCGGCGCAGGTTCCT
AACGGGGAGCGTCCACCGCC

Downstream 100 bases:

>100_bases
GTTCGCATCCGGTCTCGTGCGGGCTGTGTTATGTTGCAGCGCACAATCGAAGGAGACCGGCCATGACGTTCCTTCCCGAG
TCCGCCGACCGTCCCGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MNYRHAFHAGNFADLVKHAALLRLLARLMEDGRPLTVIDTHAGRGLYDLAGEEARKSGEAEAGIVRLMGAKDAPAAFRPL
VQAVAALNGGGPVRRYPGSPWLIAQALRPADRYLACELRKEEHDALRSALKGRANVETLCTDGYRAAVERCPPRGRALLL
IDPPFEKPDDYGRIVETLEGARASNPAVQALVWLPLKDLETFDAFLRDLEDAGLPPALVCEARIRPLADPMKMNGCALVL
WNGPDLATDLADICGWVAQALGDGGASRVYRLPSS

Sequences:

>Translated_275_residues
MNYRHAFHAGNFADLVKHAALLRLLARLMEDGRPLTVIDTHAGRGLYDLAGEEARKSGEAEAGIVRLMGAKDAPAAFRPL
VQAVAALNGGGPVRRYPGSPWLIAQALRPADRYLACELRKEEHDALRSALKGRANVETLCTDGYRAAVERCPPRGRALLL
IDPPFEKPDDYGRIVETLEGARASNPAVQALVWLPLKDLETFDAFLRDLEDAGLPPALVCEARIRPLADPMKMNGCALVL
WNGPDLATDLADICGWVAQALGDGGASRVYRLPSS
>Mature_275_residues
MNYRHAFHAGNFADLVKHAALLRLLARLMEDGRPLTVIDTHAGRGLYDLAGEEARKSGEAEAGIVRLMGAKDAPAAFRPL
VQAVAALNGGGPVRRYPGSPWLIAQALRPADRYLACELRKEEHDALRSALKGRANVETLCTDGYRAAVERCPPRGRALLL
IDPPFEKPDDYGRIVETLEGARASNPAVQALVWLPLKDLETFDAFLRDLEDAGLPPALVCEARIRPLADPMKMNGCALVL
WNGPDLATDLADICGWVAQALGDGGASRVYRLPSS

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=279, Percent_Identity=31.8996415770609, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 29779; Mature: 29779

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRHAFHAGNFADLVKHAALLRLLARLMEDGRPLTVIDTHAGRGLYDLAGEEARKSGEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHCCCC
EAGIVRLMGAKDAPAAFRPLVQAVAALNGGGPVRRYPGSPWLIAQALRPADRYLACELRK
HHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
EEHDALRSALKGRANVETLCTDGYRAAVERCPPRGRALLLIDPPFEKPDDYGRIVETLEG
HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHC
ARASNPAVQALVWLPLKDLETFDAFLRDLEDAGLPPALVCEARIRPLADPMKMNGCALVL
CCCCCCHHHEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
WNGPDLATDLADICGWVAQALGDGGASRVYRLPSS
ECCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCC
>Mature Secondary Structure
MNYRHAFHAGNFADLVKHAALLRLLARLMEDGRPLTVIDTHAGRGLYDLAGEEARKSGEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHCCCC
EAGIVRLMGAKDAPAAFRPLVQAVAALNGGGPVRRYPGSPWLIAQALRPADRYLACELRK
HHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
EEHDALRSALKGRANVETLCTDGYRAAVERCPPRGRALLLIDPPFEKPDDYGRIVETLEG
HHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHC
ARASNPAVQALVWLPLKDLETFDAFLRDLEDAGLPPALVCEARIRPLADPMKMNGCALVL
CCCCCCHHHEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEE
WNGPDLATDLADICGWVAQALGDGGASRVYRLPSS
ECCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]