Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is zur [H]

Identifier: 197104288

GI number: 197104288

Start: 906963

End: 907445

Strand: Reverse

Name: zur [H]

Synonym: PHZ_c0822

Alternate gene names: 197104288

Gene position: 907445-906963 (Counterclockwise)

Preceding gene: 197104290

Following gene: 197104286

Centisome position: 22.71

GC content: 75.16

Gene sequence:

>483_bases
ATGTCGCAGCACTGCCATCATCACGACGAGGACGCCCCGGCGGGCCTGAAGGGCTCGGCCCTGCGCCAGGCGCTGGGCGA
GGCCGAGGCGCGCTGCGCCGAGACCCACGAGCGTCTGACGCCGCCGCGGCGGCGGGTGCTGGAGCTGCTGCTGGCTTCGG
AGGGGCCGCTGAAGGCCTACGACCTGATCGCCGCCTTCGGGGCCGACGGCGAGCCGGCCAAGCCGCCGACCGTCTACCGG
GCGCTGGAGTTCCTGGAGCGGCTGGGCTTCGCCCACCGGATCGAGAGCCTGAACGCCTACGTCCCCTGCCGGATCGAGGG
CGGCCATGCGGCGGCCTTCCTGATCTGCGACTGCTGCGGGGCGGCGCAGGAGTTCGAGCCCGACTTCGGCCCGCAGCTCG
CCGCGGCGGCCGCGGCGGGCTACGCGGTCCGCTCGGTGACGCTGGAGGCCCGCGGCCTATGCGCCGCGTGCCGGGAGCAC
TGA

Upstream 100 bases:

>100_bases
GGTCCTGGGCACTTGCGACGAGGCGTCACTGTTATGAAATAACATAACGAGCCGTCAAGCCATTGGCGCCGCGGACGGAA
CCGGGTTAGCTGGAAGGGCG

Downstream 100 bases:

>100_bases
GCCCGCCGGGCGTTCCCCCTCGCCGATGCGCAAGCAGATCTACCTCGACTGCGACGGCGTGCTCGCCGACTTCGACAAGG
GCGCCGAGCAGGTGCTGGGC

Product: Fe2+/Zn2+ uptake regulation protein

Products: NA

Alternate protein names: Zinc uptake regulator [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYR
ALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH

Sequences:

>Translated_160_residues
MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYR
ALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH
>Mature_159_residues
SQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAYDLIAAFGADGEPAKPPTVYRA
LEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCGAAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH

Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI87082363, Length=148, Percent_Identity=42.5675675675676, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 17147; Mature: 17015

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
DLIAAFGADGEPAKPPTVYRALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC
AAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQHCHHHDEDAPAGLKGSALRQALGEAEARCAETHERLTPPRRRVLELLLASEGPLKAY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
DLIAAFGADGEPAKPPTVYRALEFLERLGFAHRIESLNAYVPCRIEGGHAAAFLICDCCG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHC
AAQEFEPDFGPQLAAAAAAGYAVRSVTLEARGLCAACREH
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503; 9680209 [H]