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The map label for this gene is aer [H]

Identifier: 197103910

GI number: 197103910

Start: 449711

End: 450229

Strand: Direct

Name: aer [H]

Synonym: PHZ_c0444

Alternate gene names: 197103910

Gene position: 449711-450229 (Clockwise)

Preceding gene: 197103909

Following gene: 197103911

Centisome position: 11.25

GC content: 69.36

Gene sequence:

>519_bases
ATGCAGACCGTCCAGCCGACGGGGCGTGAGCGTTCGTTCGGCCGCGACGAGATCATCGTCTCGAAAACCGACACCCGGGG
CGTGATCACCTACGCCAATCCGGTGTTCCTCCGCCTGGCCGACCTGACCGAGGCCGAGGCGGTGGGGGCGCCGCATGCCG
TGATCCGCCATCCGGACATGCCGCGCGGCGTCTTCAAGATGCTGTGGGACCGCGTGCAGGCCGGGCAGGAGGTGTTCGCC
TACGTGGTCAACATGGCCCGCAACGGCGACCACTACTGGGTGCTGGCGCACGTGACGCCGACGTTCGACGAGAGCGGCCG
GATCTGCGGATACCACTCGAACCGGCGGGCGCCCGACCGGCGCGCGGTCGAGGAGATCCAGGGCCTCTACGCCGAGATGC
GGCGGGTGGAAGACGCGGCGGGCGGCAAGGCTTCGGCGGCGGAGAGCTCGGTGGCGGCGCTCACCAACCTGCTGGCGGAA
CGCGGGGTGACCTATGACGAGTACATCTTCAGCCGCTGA

Upstream 100 bases:

>100_bases
GTTCTGGCGCGGCCTAGCTTTCGTCCCCATGGACATGGCAGGCCGCCGGGGGGCGTCCGAGAGATCGGGCGAAGGCGTCG
AAGCCCCACTTCGCAAGTTC

Downstream 100 bases:

>100_bases
CGCGCCCAGCTGCGCGGCCTGCTTCGAAGCCATCGGCCGGGTGCTGCAGCAGGCGGCGAGGGGCGACCTGGAGGGCCGGG
TCTCACCCCTGCCCGAGGAC

Product: aerotaxis receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQTVQPTGRERSFGRDEIIVSKTDTRGVITYANPVFLRLADLTEAEAVGAPHAVIRHPDMPRGVFKMLWDRVQAGQEVFA
YVVNMARNGDHYWVLAHVTPTFDESGRICGYHSNRRAPDRRAVEEIQGLYAEMRRVEDAAGGKASAAESSVAALTNLLAE
RGVTYDEYIFSR

Sequences:

>Translated_172_residues
MQTVQPTGRERSFGRDEIIVSKTDTRGVITYANPVFLRLADLTEAEAVGAPHAVIRHPDMPRGVFKMLWDRVQAGQEVFA
YVVNMARNGDHYWVLAHVTPTFDESGRICGYHSNRRAPDRRAVEEIQGLYAEMRRVEDAAGGKASAAESSVAALTNLLAE
RGVTYDEYIFSR
>Mature_172_residues
MQTVQPTGRERSFGRDEIIVSKTDTRGVITYANPVFLRLADLTEAEAVGAPHAVIRHPDMPRGVFKMLWDRVQAGQEVFA
YVVNMARNGDHYWVLAHVTPTFDESGRICGYHSNRRAPDRRAVEEIQGLYAEMRRVEDAAGGKASAAESSVAALTNLLAE
RGVTYDEYIFSR

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=127, Percent_Identity=34.6456692913386, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 19215; Mature: 19215

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVQPTGRERSFGRDEIIVSKTDTRGVITYANPVFLRLADLTEAEAVGAPHAVIRHPDM
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCHHHHHCCCCHHHHCCCCC
PRGVFKMLWDRVQAGQEVFAYVVNMARNGDHYWVLAHVTPTFDESGRICGYHSNRRAPDR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCHH
RAVEEIQGLYAEMRRVEDAAGGKASAAESSVAALTNLLAERGVTYDEYIFSR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MQTVQPTGRERSFGRDEIIVSKTDTRGVITYANPVFLRLADLTEAEAVGAPHAVIRHPDM
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEECCCHHHHHCCCCHHHHCCCCC
PRGVFKMLWDRVQAGQEVFAYVVNMARNGDHYWVLAHVTPTFDESGRICGYHSNRRAPDR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCHH
RAVEEIQGLYAEMRRVEDAAGGKASAAESSVAALTNLLAERGVTYDEYIFSR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]