| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is zraS [C]
Identifier: 197103909
GI number: 197103909
Start: 447986
End: 449476
Strand: Direct
Name: zraS [C]
Synonym: PHZ_c0443
Alternate gene names: 197103909
Gene position: 447986-449476 (Clockwise)
Preceding gene: 197103908
Following gene: 197103910
Centisome position: 11.21
GC content: 75.72
Gene sequence:
>1491_bases ATGATGGCGGACGCCCCAGCGCCCAACGAGCCGCCCGCGCGGGACAGACGGCGCCGCCTGTTCTGGCCCGGCGGCCTCTC GGCGCGCCTGCTGGTCCTGACCGTGCTGTTCGCGGCCCTGGGCGGGCTTATCGCCATCCCGCCGGCCCTGGCCGCCTTCG AGCGCCAGTGGCTGCTGGACCGGGTGCGGGCCGCCGAGCTGGCCTCGCTGGCCCCCGAGGTGGCCCCGGACCGGGTGGTG AGCGAACAGCTCAAGACCGAGCTGCTGCGCGGCGCGGGCGTGGAGATCGTGGCCATATCGGTGGACGGGGTCCGCTCGCT GGTGTTCGCGGGGGCGAGGCCCGCCGAGGCGCCCTATCTCGTGGACCTGCGGCCCCGGGCGGCGGCGGGCCTGGGGGTGT TCGCGCCGTTCCGGACGCTGTTCGGGCCCGAGGGGCGGCGGGTGCGGGTGGTGGCCGAGCCGCGGTTCCGCGAGGCCGAG TTCATCGAGTTCGTCGCCACCGACACCGAGCTGAAGCGCGCGCTGGCGGGCTATCTGTGGCGGCTGATCGGCATCGTGGT CTTCGTCTCGACGCTGGCCGGGGTGCTGGTGTTCGTGGCGCTGAACCTGTTCCTCGTGCGGCCGATGCAGCGGATCACCC ACGCCATGGAGCGGTTCCGGGCCGACCCCGACGATCCCGCCGCCCGGGTGGAGCTGTCGGGGCGGCGCGACGAGATCGGC CGCGCCGAGGCCGAGCTCGACCGCATGCAGGCCGACCTGCGCGTGGCGCTGAACTCGCGGGCGCGGCTGGCGGCCCTGGG CGAGGCGGTGGCCAAGATCAACCACGACCTGAAGAACATGCTCACCTCGGCCCAGATCGCCTCCGAGCGGCTGGCGGCGC TGCAGGACCCCAAGGTCTCCCAGGCCCTGCCGCGGCTGGAGCGGGCGCTGGACCGGGCGGTGAAACTCGCCTCGGACGTG CTGGCCTACGGCAAGACCCAGGAGGCCGCGCCCGAGCCGCGGAGGGTCGCCCTGGCCGAGGCGGTGGCCGAGGCGGCGCT GGAGGCGCGGCTGTCGGACGAGGGCGTGCGGCTGGTCTCGAAGGTGGAGCGCAGCGCGCAGGTCACGGCCGATCCCGACC AGCTGCACCGGATCCTCGCCAACCTGTTCCGCAACGCCCGCGAGGCGATCGAGCACCAGGAGGGCCGCACGGCGCCCGGC CGGGTGGAGGTTTCGCTGGCGGCGGCGAACGGCGGCTGCCTGGTGCGGGTGGCCGACAACGGGCCGGGGATTCCCGGCCG GGTGCGCGAGCGGCTGTTCCAGCCGTTCGCCGGCTCGGGGCGGCCCGACGGGGCGGGCCTGGGCCTGGCCATCGCCCGCG AGCTGGCGCTGGGCCACGGCGGCGACCTGTCTCTGGCGGCGACGGGCCCCGAGGGCTCGGTCTTCGAGCTGCGCCTGCCC GGCGCCCCGACCAAGGCTCCCGCCCGCCGGCGGACGAAGAGTCCGGCCTGA
Upstream 100 bases:
>100_bases CGGACGGTTTTGCTTCGCTCGGCGACGCGGTGGGCGCAAAATAGCAGAGCTGTCAGGGCCTTGCGTTGCCCTGGCCCTCC GCTCGCATTAACTCGGAAGG
Downstream 100 bases:
>100_bases CCCCTGAAGGGCAACGCCGTATGCTGTTCAAGTAATCGGTGTCATTGTATATGTAACGGGTCGCAAATTACGGCGATTCG AATCCCGCATATTCGGGAAA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MMADAPAPNEPPARDRRRRLFWPGGLSARLLVLTVLFAALGGLIAIPPALAAFERQWLLDRVRAAELASLAPEVAPDRVV SEQLKTELLRGAGVEIVAISVDGVRSLVFAGARPAEAPYLVDLRPRAAAGLGVFAPFRTLFGPEGRRVRVVAEPRFREAE FIEFVATDTELKRALAGYLWRLIGIVVFVSTLAGVLVFVALNLFLVRPMQRITHAMERFRADPDDPAARVELSGRRDEIG RAEAELDRMQADLRVALNSRARLAALGEAVAKINHDLKNMLTSAQIASERLAALQDPKVSQALPRLERALDRAVKLASDV LAYGKTQEAAPEPRRVALAEAVAEAALEARLSDEGVRLVSKVERSAQVTADPDQLHRILANLFRNAREAIEHQEGRTAPG RVEVSLAAANGGCLVRVADNGPGIPGRVRERLFQPFAGSGRPDGAGLGLAIARELALGHGGDLSLAATGPEGSVFELRLP GAPTKAPARRRTKSPA
Sequences:
>Translated_496_residues MMADAPAPNEPPARDRRRRLFWPGGLSARLLVLTVLFAALGGLIAIPPALAAFERQWLLDRVRAAELASLAPEVAPDRVV SEQLKTELLRGAGVEIVAISVDGVRSLVFAGARPAEAPYLVDLRPRAAAGLGVFAPFRTLFGPEGRRVRVVAEPRFREAE FIEFVATDTELKRALAGYLWRLIGIVVFVSTLAGVLVFVALNLFLVRPMQRITHAMERFRADPDDPAARVELSGRRDEIG RAEAELDRMQADLRVALNSRARLAALGEAVAKINHDLKNMLTSAQIASERLAALQDPKVSQALPRLERALDRAVKLASDV LAYGKTQEAAPEPRRVALAEAVAEAALEARLSDEGVRLVSKVERSAQVTADPDQLHRILANLFRNAREAIEHQEGRTAPG RVEVSLAAANGGCLVRVADNGPGIPGRVRERLFQPFAGSGRPDGAGLGLAIARELALGHGGDLSLAATGPEGSVFELRLP GAPTKAPARRRTKSPA >Mature_496_residues MMADAPAPNEPPARDRRRRLFWPGGLSARLLVLTVLFAALGGLIAIPPALAAFERQWLLDRVRAAELASLAPEVAPDRVV SEQLKTELLRGAGVEIVAISVDGVRSLVFAGARPAEAPYLVDLRPRAAAGLGVFAPFRTLFGPEGRRVRVVAEPRFREAE FIEFVATDTELKRALAGYLWRLIGIVVFVSTLAGVLVFVALNLFLVRPMQRITHAMERFRADPDDPAARVELSGRRDEIG RAEAELDRMQADLRVALNSRARLAALGEAVAKINHDLKNMLTSAQIASERLAALQDPKVSQALPRLERALDRAVKLASDV LAYGKTQEAAPEPRRVALAEAVAEAALEARLSDEGVRLVSKVERSAQVTADPDQLHRILANLFRNAREAIEHQEGRTAPG RVEVSLAAANGGCLVRVADNGPGIPGRVRERLFQPFAGSGRPDGAGLGLAIARELALGHGGDLSLAATGPEGSVFELRLP GAPTKAPARRRTKSPA
Specific function: Member of the two-component regulatory system RT0603/RT0550 [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=27.3469387755102, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=26.8085106382979, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789149, Length=229, Percent_Identity=29.2576419213974, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790300, Length=232, Percent_Identity=30.6034482758621, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI145693157, Length=296, Percent_Identity=25, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789808, Length=221, Percent_Identity=27.1493212669683, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53339; Mature: 53339
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADAPAPNEPPARDRRRRLFWPGGLSARLLVLTVLFAALGGLIAIPPALAAFERQWLLD CCCCCCCCCCCCCHHHHCEECCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH RVRAAELASLAPEVAPDRVVSEQLKTELLRGAGVEIVAISVDGVRSLVFAGARPAEAPYL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCEE VDLRPRAAAGLGVFAPFRTLFGPEGRRVRVVAEPRFREAEFIEFVATDTELKRALAGYLW EECCCCHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH RLIGIVVFVSTLAGVLVFVALNLFLVRPMQRITHAMERFRADPDDPAARVELSGRRDEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH RAEAELDRMQADLRVALNSRARLAALGEAVAKINHDLKNMLTSAQIASERLAALQDPKVS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QALPRLERALDRAVKLASDVLAYGKTQEAAPEPRRVALAEAVAEAALEARLSDEGVRLVS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH KVERSAQVTADPDQLHRILANLFRNAREAIEHQEGRTAPGRVEVSLAAANGGCLVRVADN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCC GPGIPGRVRERLFQPFAGSGRPDGAGLGLAIARELALGHGGDLSLAATGPEGSVFELRLP CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECC GAPTKAPARRRTKSPA CCCCCCCHHCCCCCCC >Mature Secondary Structure MMADAPAPNEPPARDRRRRLFWPGGLSARLLVLTVLFAALGGLIAIPPALAAFERQWLLD CCCCCCCCCCCCCHHHHCEECCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH RVRAAELASLAPEVAPDRVVSEQLKTELLRGAGVEIVAISVDGVRSLVFAGARPAEAPYL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCEE VDLRPRAAAGLGVFAPFRTLFGPEGRRVRVVAEPRFREAEFIEFVATDTELKRALAGYLW EECCCCHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH RLIGIVVFVSTLAGVLVFVALNLFLVRPMQRITHAMERFRADPDDPAARVELSGRRDEIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH RAEAELDRMQADLRVALNSRARLAALGEAVAKINHDLKNMLTSAQIASERLAALQDPKVS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QALPRLERALDRAVKLASDVLAYGKTQEAAPEPRRVALAEAVAEAALEARLSDEGVRLVS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH KVERSAQVTADPDQLHRILANLFRNAREAIEHQEGRTAPGRVEVSLAAANGGCLVRVADN HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCC GPGIPGRVRERLFQPFAGSGRPDGAGLGLAIARELALGHGGDLSLAATGPEGSVFELRLP CCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECC GAPTKAPARRRTKSPA CCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA