| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103709
Identifier: 197103709
GI number: 197103709
Start: 244857
End: 245996
Strand: Reverse
Name: 197103709
Synonym: PHZ_c0243
Alternate gene names: NA
Gene position: 245996-244857 (Counterclockwise)
Preceding gene: 197103710
Following gene: 197103708
Centisome position: 6.16
GC content: 76.23
Gene sequence:
>1140_bases GTGGCGAACATCGCACTGCCCCAGTTCAAGCCTCCCGCCTTCAAGCTTCCGGCGCCGGACCTCGCCGGCCTGCTGAAGAG CCCGCTCGCCGGCGTGGCCGCGGCCGCGGCGCTGTTCGCGGGGGCGGCGGTGGCCCTGGTCGCGCTGATGGGCCCGTTCG AGGGCGGCGCCCCGCACGCCCGCCTGCCGCTGGACGCGGCCTTCCACGCCGCCCCGCCCGGCTGGCGCGAGGCCTTGCGG CCCGCGCAGGGCCCGCTCGTCGTCCAGCCCGACGTGGTGCGCCTGTCCGAGCGACCGCTGGCCCCGCTGGCGGCCACCGG CTGGAACGCCCCGGCCGCCCCGCCGGTGCGCGCCCTGGCCGGCGGCGCCCTGCCGGCCGCGCCGATCGCCGGCTTCTTCG CCCCGGGCCCCGGCGGCCCGCTGCCGATCATCGCCCAGGACGGGCGCACGCCGGCCGAGGTCTACGCCCGGCCCTTCACC TCCAACGGCCGGCCGAAGATCGGCCTCGTCGTCGGCGGCCTCGGCCTCAACGCCCGCGCCACCCGCCAGGCCATCGAGAC CCTGCGCCCCGAGATCACGCTCTCGTTCGTGGTCTACGCCGAGGGCCTGCAGGGCTGGATCGACATGGCCCGCGCCCACG GCCACGAGGTGCTGCTGGAGACCCCGCTGGAGCCGCTGGACTATCCCGACAACGATCCCGGCCCCTACACCCTGATGACC GACGCCTCGCCGCCCGAGACGGCGAAGAAGCTGGAGTGGATCCTCTCGCGCGCCAGCGGCTACTTCGGCCTGACCAATTA TCTCGGCTCCCGCTTCCTCGCCGACGACCGCGCCTACGAGGCCCTGGCCGCCTCGCTGCGGGCCCGGGGCCTGGCCTTCG TCGACGACGGAACCGCCGCGCGCCGGGGCGGGAACGTGCCCCGGGCCACCGCCGAGCGGGTGATCGACGACCAGCTCTCG GCCGGCGCCATCGACCAGCAGCTCCTGGCGCTCGAGGCCGGCGCCCTGCAGCGCGGCCAGGCGCTGGGCTCGGGCTTCGC CTATCCGGTGACCCTGGAGACCGTGGCGCGTTGGGCGAACGAGGTGGAGCAGAGGGGCTATCAGCTGGCCCCCGCCTCGG CGCTCATGGCCCGGAGATGA
Upstream 100 bases:
>100_bases GGACAAGGTCGCCGCCGTCAAGCCGCCGCCGTCGGTCACCCAGAAGTAGCGGCCCGTTAACCATGGTGCGGGAGGCTCCC CCGGAAGGAGCCTCCCGCGC
Downstream 100 bases:
>100_bases CCGACCTATCCCGCTACCGTCCCAATGTCGGCGTGGTGCTCTTCCATCCCGACGGCCGCGTGTGGTTGGGCCGCCGCGCC GGCGCGGCCCCGCCCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MANIALPQFKPPAFKLPAPDLAGLLKSPLAGVAAAAALFAGAAVALVALMGPFEGGAPHARLPLDAAFHAAPPGWREALR PAQGPLVVQPDVVRLSERPLAPLAATGWNAPAAPPVRALAGGALPAAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFT SNGRPKIGLVVGGLGLNARATRQAIETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMT DASPPETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAARRGGNVPRATAERVIDDQLS AGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWANEVEQRGYQLAPASALMARR
Sequences:
>Translated_379_residues MANIALPQFKPPAFKLPAPDLAGLLKSPLAGVAAAAALFAGAAVALVALMGPFEGGAPHARLPLDAAFHAAPPGWREALR PAQGPLVVQPDVVRLSERPLAPLAATGWNAPAAPPVRALAGGALPAAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFT SNGRPKIGLVVGGLGLNARATRQAIETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMT DASPPETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAARRGGNVPRATAERVIDDQLS AGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWANEVEQRGYQLAPASALMARR >Mature_378_residues ANIALPQFKPPAFKLPAPDLAGLLKSPLAGVAAAAALFAGAAVALVALMGPFEGGAPHARLPLDAAFHAAPPGWREALRP AQGPLVVQPDVVRLSERPLAPLAATGWNAPAAPPVRALAGGALPAAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFTS NGRPKIGLVVGGLGLNARATRQAIETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMTD ASPPETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAARRGGNVPRATAERVIDDQLSA GAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWANEVEQRGYQLAPASALMARR
Specific function: Unknown
COG id: COG2861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39518; Mature: 39386
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIALPQFKPPAFKLPAPDLAGLLKSPLAGVAAAAALFAGAAVALVALMGPFEGGAPHA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RLPLDAAFHAAPPGWREALRPAQGPLVVQPDVVRLSERPLAPLAATGWNAPAAPPVRALA CCCHHHHHCCCCCCHHHHCCCCCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCHHHHH GGALPAAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFTSNGRPKIGLVVGGLGLNARA CCCCCCHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCHHH TRQAIETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMT HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEE DASPPETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHH RRGGNVPRATAERVIDDQLSAGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWAN HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH EVEQRGYQLAPASALMARR HHHHCCCEECCHHHHHHCC >Mature Secondary Structure ANIALPQFKPPAFKLPAPDLAGLLKSPLAGVAAAAALFAGAAVALVALMGPFEGGAPHA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RLPLDAAFHAAPPGWREALRPAQGPLVVQPDVVRLSERPLAPLAATGWNAPAAPPVRALA CCCHHHHHCCCCCCHHHHCCCCCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCHHHHH GGALPAAPIAGFFAPGPGGPLPIIAQDGRTPAEVYARPFTSNGRPKIGLVVGGLGLNARA CCCCCCHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCHHH TRQAIETLRPEITLSFVVYAEGLQGWIDMARAHGHEVLLETPLEPLDYPDNDPGPYTLMT HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEE DASPPETAKKLEWILSRASGYFGLTNYLGSRFLADDRAYEALAASLRARGLAFVDDGTAA CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHH RRGGNVPRATAERVIDDQLSAGAIDQQLLALEAGALQRGQALGSGFAYPVTLETVARWAN HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH EVEQRGYQLAPASALMARR HHHHCCCEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA