Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197103623

Identifier: 197103623

GI number: 197103623

Start: 146244

End: 146789

Strand: Direct

Name: 197103623

Synonym: PHZ_c0157

Alternate gene names: NA

Gene position: 146244-146789 (Clockwise)

Preceding gene: 197103621

Following gene: 197103624

Centisome position: 3.66

GC content: 68.86

Gene sequence:

>546_bases
ATGTCGCAAGCCTTCGAAAAGCCCGCCCGCAAGTTCGGCTTCGGGACCTACTTCGCCCTGGCCATGGTTGCGGTGGCCGC
GATCCTGACCCTGGCGCTCGGGCCGTTCTGGCTGGGCGTCTTCCGGATGGCCGGGGAGGCGCGGCCGCACGCCCCGAACC
TTTCGCTGTTCGCCGGACTTTCGACGCCCATCAAGATCCACCTCGTCACCGCCCTGGCGGCGCTGGCGCTGGGCGGGGTG
CTGATGGCCGCGCGCAAGGGGCGGACCTTCCACCGCCTCGCCGGCTGGACCTGGGTGGGACTGGTGTCGGTCAGCGCGGG
CGTCACGGTCTTCATCACCAGCCTGAACAACGGGAGCTGGTCCTGGATCCACCTGTTCACCGGCTGGACCCTGCTGGTCC
TGCCGCTGGCCGTCCTCGCGGCCAAGCGCCACGACGTCGCCCGGCACCGGCGGCGGATGATGGGCCTGTTCTACGGCGCC
TTCGCGATCAACTTCTTCATCGCCTTCATTCCGGGTCGGGTGATGTGGGCGATGGTGTTCGGCTGA

Upstream 100 bases:

>100_bases
CCGGCCGTCCCCCGACGCATCCGCTGTCGCGCCCTCAAGGCCACCCCGCCATCACCCGGTCCGACCGGCGCCGACGCGCC
GCCTGGACCGGAGATAGAGC

Downstream 100 bases:

>100_bases
GGCGCCGGCGGAGCCTTGCTCACGCTGGGGAAGCACCGTGAAGGATAACGCGGTTCAAGGGGGCCCGCGCGGTTGTCATC
GAGGGGCGCGGCGCCTATAA

Product: conserved predicted membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGV
LMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGA
FAINFFIAFIPGRVMWAMVFG

Sequences:

>Translated_181_residues
MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGV
LMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGA
FAINFFIAFIPGRVMWAMVFG
>Mature_180_residues
SQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGLSTPIKIHLVTALAALALGGVL
MAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSWSWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAF
AINFFIAFIPGRVMWAMVFG

Specific function: Unknown

COG id: COG5395

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19748; Mature: 19617

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGL
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
STPIKIHLVTALAALALGGVLMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSW
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCE
SWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAFAINFFIAFIPGRVMWAMVF
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
G
C
>Mature Secondary Structure 
SQAFEKPARKFGFGTYFALAMVAVAAILTLALGPFWLGVFRMAGEARPHAPNLSLFAGL
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
STPIKIHLVTALAALALGGVLMAARKGRTFHRLAGWTWVGLVSVSAGVTVFITSLNNGSW
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCE
SWIHLFTGWTLLVLPLAVLAAKRHDVARHRRRMMGLFYGAFAINFFIAFIPGRVMWAMVF
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA