| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yleA [C]
Identifier: 197103594
GI number: 197103594
Start: 121363
End: 122760
Strand: Direct
Name: yleA [C]
Synonym: PHZ_c0128
Alternate gene names: 197103594
Gene position: 121363-122760 (Clockwise)
Preceding gene: 197103593
Following gene: 197103595
Centisome position: 3.04
GC content: 73.18
Gene sequence:
>1398_bases ATGGCGCGCGGACGGCCACGTGATCATGACCGGCCCGGCGGCCGTCGACTTCCAGGGCGAGCTGCCGTGAGCGGCTTCGA GGCCCCCTCCGTCTCGACGCGTTCGCGCCGATCCACCTCCCCCCCTTCGCAGGGGAGGAGCGACGTCGACATCGTCACGT TCGGCTGCCGGCTGAACGCCTACGAGAGCGAGGTCATCCGCAAGCGGGCGGCCGAGGACGGCCTTTCGGACGCCATCGTG TTCAACACCTGTGCGGTGACGGGCGAGGCGGTGCGCCAGGCCCGGCAGGCGATCCGCAAGGCCCGCCGCGAGCGGCCGGG CGCGAAGGTGATCGTCACCGGCTGCGCGGCCCAGATCGATCCCGACGCCTTCGCCGCCATGGACGAGGTCGACCTGGTGC TCGGCAACGCCGAGAAGAGCCAGGCCGGGTCCTATGCGCCGACGGCCGAGGCCGGCCGCGTGCGCGTCAATGACATCATG AGCGTGCGCGAGACGGCGGGCCATCTCATCGACGGATTGAAAGACCGCGCGCGGGCCTATGTCGAGGTCCAGAACGGCTG TGACCACCGCTGCACCTTCTGCATCATCCCCTACGGCCGCGGGAACTCCCGCTCGGCGCCCGCCGGCGAGGTGGTCGAGC AGGTTCGCCGGCTGGCGGGCGAAGGCTACCAGGAGGTCGTGCTCACCGGCGTGGACGTGACGAGCTGGGGCGCCGACCTG CCGGGCGCCCCGACCCTGGGCCAGCTGGTCGGGCGAATCCTGAAGCTGGCGCCCGGGCTGCCGCGCCTGCGGCTGTCGTC CATCGACGCGGCCGAGATCGACGCCGACCTGCTGCGGCTCCTCGCCGAGGAGCCCCGGCTGATGCCCTACCTGCACCTCA GCCTTCAGGCAGGGGACGACATGATCCTGAAGCGCATGAAGCGCCGCCACAGCCGCGCCGACGCGCTGAGGCTCGTCGCC GACGTGCGCGCGGTGCGCCCCGACGTGGCCTTCGGCGCCGACCTGATCGCCGGTTTCCCGACCGAGACGGACGAGATGTT CGAGAACACCCTGCGGCTGGTGGAGGAGGCGGGACTCGCGTTCCTGCACGTCTTCCCCTTCAGCCCCAGGCCGGGCACGC CGGCGGCCCGGATGCCGCAACTGCCGCGCGAGGTGGTGAAGGCTCGCGCCGCCCGCCTGCGCGCCGCCGGCGAGGCCGCC CTGGACCGCCACCTGGAGGCCCAGGTCGGCCGGACGCTGCTGGGCCTCGTCGAGCGGCCCGGGTTCGCGCGCGCCGAGGA CTTCACCGAGATCGCCTTCACCGGCGAGGCGGCGGAGGGGGCCGTCGTCGCCCTGGCGGTCACCGCACACGACGGCCGGC GGGCGATCGCCCGCGTTCAGGAGAGGGGCGCGGCATGA
Upstream 100 bases:
>100_bases GCGGCACCGGCGCCTGCGCGGCCATGGTGGCCGCCTCGCGCCGCGGCCTGATCGGCCGCCACGCGACGATGGAGCTGGAC GGCGGCGAGCTGTTCGTCGA
Downstream 100 bases:
>100_bases GCTGGACCGGCGGATGCCAGTGCGGGAAGGTCCGCTTCCGGGTGGAGGGCGAGCTGGGGCGCGCCAGCATCTGCCACTGC CGCATGTGCCAGAAGGCGAC
Product: 2-methylthioadenine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MARGRPRDHDRPGGRRLPGRAAVSGFEAPSVSTRSRRSTSPPSQGRSDVDIVTFGCRLNAYESEVIRKRAAEDGLSDAIV FNTCAVTGEAVRQARQAIRKARRERPGAKVIVTGCAAQIDPDAFAAMDEVDLVLGNAEKSQAGSYAPTAEAGRVRVNDIM SVRETAGHLIDGLKDRARAYVEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRRLAGEGYQEVVLTGVDVTSWGADL PGAPTLGQLVGRILKLAPGLPRLRLSSIDAAEIDADLLRLLAEEPRLMPYLHLSLQAGDDMILKRMKRRHSRADALRLVA DVRAVRPDVAFGADLIAGFPTETDEMFENTLRLVEEAGLAFLHVFPFSPRPGTPAARMPQLPREVVKARAARLRAAGEAA LDRHLEAQVGRTLLGLVERPGFARAEDFTEIAFTGEAAEGAVVALAVTAHDGRRAIARVQERGAA
Sequences:
>Translated_465_residues MARGRPRDHDRPGGRRLPGRAAVSGFEAPSVSTRSRRSTSPPSQGRSDVDIVTFGCRLNAYESEVIRKRAAEDGLSDAIV FNTCAVTGEAVRQARQAIRKARRERPGAKVIVTGCAAQIDPDAFAAMDEVDLVLGNAEKSQAGSYAPTAEAGRVRVNDIM SVRETAGHLIDGLKDRARAYVEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRRLAGEGYQEVVLTGVDVTSWGADL PGAPTLGQLVGRILKLAPGLPRLRLSSIDAAEIDADLLRLLAEEPRLMPYLHLSLQAGDDMILKRMKRRHSRADALRLVA DVRAVRPDVAFGADLIAGFPTETDEMFENTLRLVEEAGLAFLHVFPFSPRPGTPAARMPQLPREVVKARAARLRAAGEAA LDRHLEAQVGRTLLGLVERPGFARAEDFTEIAFTGEAAEGAVVALAVTAHDGRRAIARVQERGAA >Mature_464_residues ARGRPRDHDRPGGRRLPGRAAVSGFEAPSVSTRSRRSTSPPSQGRSDVDIVTFGCRLNAYESEVIRKRAAEDGLSDAIVF NTCAVTGEAVRQARQAIRKARRERPGAKVIVTGCAAQIDPDAFAAMDEVDLVLGNAEKSQAGSYAPTAEAGRVRVNDIMS VRETAGHLIDGLKDRARAYVEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRRLAGEGYQEVVLTGVDVTSWGADLP GAPTLGQLVGRILKLAPGLPRLRLSSIDAAEIDADLLRLLAEEPRLMPYLHLSLQAGDDMILKRMKRRHSRADALRLVAD VRAVRPDVAFGADLIAGFPTETDEMFENTLRLVEEAGLAFLHVFPFSPRPGTPAARMPQLPREVVKARAARLRAAGEAAL DRHLEAQVGRTLLGLVERPGFARAEDFTEIAFTGEAAEGAVVALAVTAHDGRRAIARVQERGAA
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=379, Percent_Identity=29.8153034300792, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI28872782, Length=413, Percent_Identity=25.181598062954, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI28872784, Length=413, Percent_Identity=24.9394673123487, Blast_Score=132, Evalue=9e-31, Organism=Escherichia coli, GI1786882, Length=362, Percent_Identity=28.7292817679558, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1787057, Length=390, Percent_Identity=29.7435897435897, Blast_Score=156, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17553146, Length=386, Percent_Identity=31.0880829015544, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI71996771, Length=220, Percent_Identity=32.2727272727273, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI19922432, Length=368, Percent_Identity=29.8913043478261, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI21356207, Length=407, Percent_Identity=26.7813267813268, Blast_Score=153, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 50120; Mature: 49988
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGRPRDHDRPGGRRLPGRAAVSGFEAPSVSTRSRRSTSPPSQGRSDVDIVTFGCRLNA CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH YESEVIRKRAAEDGLSDAIVFNTCAVTGEAVRQARQAIRKARRERPGAKVIVTGCAAQID HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDAFAAMDEVDLVLGNAEKSQAGSYAPTAEAGRVRVNDIMSVRETAGHLIDGLKDRARAY CHHHHHHHHHHHEECCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEE VEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRRLAGEGYQEVVLTGVDVTSWGADL EECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCCHHCCCCCC PGAPTLGQLVGRILKLAPGLPRLRLSSIDAAEIDADLLRLLAEEPRLMPYLHLSLQAGDD CCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCH MILKRMKRRHSRADALRLVADVRAVRPDVAFGADLIAGFPTETDEMFENTLRLVEEAGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCE FLHVFPFSPRPGTPAARMPQLPREVVKARAARLRAAGEAALDRHLEAQVGRTLLGLVERP EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFARAEDFTEIAFTGEAAEGAVVALAVTAHDGRRAIARVQERGAA CCCCCCCCHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure ARGRPRDHDRPGGRRLPGRAAVSGFEAPSVSTRSRRSTSPPSQGRSDVDIVTFGCRLNA CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH YESEVIRKRAAEDGLSDAIVFNTCAVTGEAVRQARQAIRKARRERPGAKVIVTGCAAQID HHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC PDAFAAMDEVDLVLGNAEKSQAGSYAPTAEAGRVRVNDIMSVRETAGHLIDGLKDRARAY CHHHHHHHHHHHEECCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEE VEVQNGCDHRCTFCIIPYGRGNSRSAPAGEVVEQVRRLAGEGYQEVVLTGVDVTSWGADL EECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCCHHCCCCCC PGAPTLGQLVGRILKLAPGLPRLRLSSIDAAEIDADLLRLLAEEPRLMPYLHLSLQAGDD CCCCCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCH MILKRMKRRHSRADALRLVADVRAVRPDVAFGADLIAGFPTETDEMFENTLRLVEEAGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCE FLHVFPFSPRPGTPAARMPQLPREVVKARAARLRAAGEAALDRHLEAQVGRTLLGLVERP EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GFARAEDFTEIAFTGEAAEGAVVALAVTAHDGRRAIARVQERGAA CCCCCCCCHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]