| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is tesB [H]
Identifier: 197103579
GI number: 197103579
Start: 103547
End: 104419
Strand: Direct
Name: tesB [H]
Synonym: PHZ_c0113
Alternate gene names: 197103579
Gene position: 103547-104419 (Clockwise)
Preceding gene: 197103575
Following gene: 197103580
Centisome position: 2.59
GC content: 68.73
Gene sequence:
>873_bases ATGAGCGAGACCGACGCCCAAGACGAGACCCTGGTCGAGACTCTCCAGCTGGAGCGGATCGAGGAGAACCTGTTCCGCGG GACCTCGCCCGACAACGCGCCGGGCCGCATCTTCGGCGGGCAGGTGATCGCCCAGTCGCTGCTGGCGGCCTACGAGACGG TGGAGTCGCGGGTCTGCCACTCGCTGCACTGCTATTTCATCCGGCCGGGCGATCCGACCGTGCCGATCGTCTTCGAGGTG GACCGGTCCCGCGACGGCGGCAGCTTCACCACCCGCCGGGTCGTGGCGGTCCAGCACGGCAAGCAGATCTTCAATCTCGC CGCCTCGTTCAAGGACCCGGAGGAGGGCTTCCGCCACCAGGCCCCGATGCCGGAAGGCCCGCACTGGTCCGAGCTGAAGG ACCAGATGGAGGTCCTGCGCGAGCTGATGAAGGACGCGCCCGAACAGGCCAAGCGCTGGCTCTCGCGGCCGATGCCGATC GAGATGCGCTCGAAGGACGCCCGGACCTACTGGCTGGACGGGCCCAAGGAGCCGGTGTCGCAGAACTGGTTCCGGTGCCG CACGCCGATCGGGGGCGATGCGCGCATGCACCAGGTGATCCTGGCCTACGCGTCGGACATGAACCTGCTCTCGACGGCCA TGCGTCCGCACCAGGTCCACTGGCAGACGCCGGGCTTCCAGTCGGCGAGCCTGGACCACGCCATGTGGTTCCACGCCCCG ACCGACTTCAACACCTGGCACCTCTACGTCCACGACAGCCCCTCGGCGTCGGACGGGCGCGGACTGATCCGGGGCGCGAT CTACGCCGAGGACGGCACGCTGGTCGCCTCGGTCGCCCAGGAAGGCCTGATGCGGATGAAGGCCGCGAAGTAG
Upstream 100 bases:
>100_bases AGTACGGCGCAGTCGAAGGACATGGCGGTCGTAAGGCGGGCGCCGACGCCGCCACGTCAAGCCTTGCCGGGCGCGGCGCC CCCGCGTATCGCCGCTGGTC
Downstream 100 bases:
>100_bases ACGGCCTCGCCGCGGCGGCGTAATGCACGCGCCTTCGCACTTGCAGCATCCGCGGACGCCATGGACACCCAGACGCTGGT CGAAACGCTCGGGCTGGAGC
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSETDAQDETLVETLQLERIEENLFRGTSPDNAPGRIFGGQVIAQSLLAAYETVESRVCHSLHCYFIRPGDPTVPIVFEV DRSRDGGSFTTRRVVAVQHGKQIFNLAASFKDPEEGFRHQAPMPEGPHWSELKDQMEVLRELMKDAPEQAKRWLSRPMPI EMRSKDARTYWLDGPKEPVSQNWFRCRTPIGGDARMHQVILAYASDMNLLSTAMRPHQVHWQTPGFQSASLDHAMWFHAP TDFNTWHLYVHDSPSASDGRGLIRGAIYAEDGTLVASVAQEGLMRMKAAK
Sequences:
>Translated_290_residues MSETDAQDETLVETLQLERIEENLFRGTSPDNAPGRIFGGQVIAQSLLAAYETVESRVCHSLHCYFIRPGDPTVPIVFEV DRSRDGGSFTTRRVVAVQHGKQIFNLAASFKDPEEGFRHQAPMPEGPHWSELKDQMEVLRELMKDAPEQAKRWLSRPMPI EMRSKDARTYWLDGPKEPVSQNWFRCRTPIGGDARMHQVILAYASDMNLLSTAMRPHQVHWQTPGFQSASLDHAMWFHAP TDFNTWHLYVHDSPSASDGRGLIRGAIYAEDGTLVASVAQEGLMRMKAAK >Mature_289_residues SETDAQDETLVETLQLERIEENLFRGTSPDNAPGRIFGGQVIAQSLLAAYETVESRVCHSLHCYFIRPGDPTVPIVFEVD RSRDGGSFTTRRVVAVQHGKQIFNLAASFKDPEEGFRHQAPMPEGPHWSELKDQMEVLRELMKDAPEQAKRWLSRPMPIE MRSKDARTYWLDGPKEPVSQNWFRCRTPIGGDARMHQVILAYASDMNLLSTAMRPHQVHWQTPGFQSASLDHAMWFHAPT DFNTWHLYVHDSPSASDGRGLIRGAIYAEDGTLVASVAQEGLMRMKAAK
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=292, Percent_Identity=40.0684931506849, Blast_Score=206, Evalue=3e-53, Organism=Escherichia coli, GI1786657, Length=269, Percent_Identity=45.724907063197, Blast_Score=246, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71988741, Length=302, Percent_Identity=37.0860927152318, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17558508, Length=313, Percent_Identity=35.7827476038339, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI115532456, Length=277, Percent_Identity=36.101083032491, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17531889, Length=277, Percent_Identity=36.101083032491, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17531885, Length=277, Percent_Identity=36.101083032491, Blast_Score=140, Evalue=8e-34, Organism=Caenorhabditis elegans, GI212645202, Length=289, Percent_Identity=33.9100346020761, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71982224, Length=300, Percent_Identity=31.3333333333333, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32788; Mature: 32657
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETDAQDETLVETLQLERIEENLFRGTSPDNAPGRIFGGQVIAQSLLAAYETVESRVCH CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHC SLHCYFIRPGDPTVPIVFEVDRSRDGGSFTTRRVVAVQHGKQIFNLAASFKDPEEGFRHQ CEEEEEECCCCCCEEEEEEECCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHCC APMPEGPHWSELKDQMEVLRELMKDAPEQAKRWLSRPMPIEMRSKDARTYWLDGPKEPVS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCC QNWFRCRTPIGGDARMHQVILAYASDMNLLSTAMRPHQVHWQTPGFQSASLDHAMWFHAP CCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECC TDFNTWHLYVHDSPSASDGRGLIRGAIYAEDGTLVASVAQEGLMRMKAAK CCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SETDAQDETLVETLQLERIEENLFRGTSPDNAPGRIFGGQVIAQSLLAAYETVESRVCH CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHC SLHCYFIRPGDPTVPIVFEVDRSRDGGSFTTRRVVAVQHGKQIFNLAASFKDPEEGFRHQ CEEEEEECCCCCCEEEEEEECCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCHHHHHHCC APMPEGPHWSELKDQMEVLRELMKDAPEQAKRWLSRPMPIEMRSKDARTYWLDGPKEPVS CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCC QNWFRCRTPIGGDARMHQVILAYASDMNLLSTAMRPHQVHWQTPGFQSASLDHAMWFHAP CCCEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECC TDFNTWHLYVHDSPSASDGRGLIRGAIYAEDGTLVASVAQEGLMRMKAAK CCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]