Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197103575

Identifier: 197103575

GI number: 197103575

Start: 101070

End: 101462

Strand: Direct

Name: 197103575

Synonym: PHZ_c0109

Alternate gene names: NA

Gene position: 101070-101462 (Clockwise)

Preceding gene: 197103574

Following gene: 197103579

Centisome position: 2.53

GC content: 73.03

Gene sequence:

>393_bases
ATGACGGCGTACGAGGGCGGCTGCTTCTGCGGACGGGTCCGCTTCCGCGCCGAGGGTGCGCCGGTGAACGTGCGCGTCTG
CCACTGCCGCATGTGCCAGAGGGTCACGGGCCAGCCGTTCTTCGCCCGGGCGCTGTTCGCGACCGAGCAGGTGGCGATCG
AGGGCGAGCCGCAGTGGTTCGCCTCGTCGGACGACCTCTCCCGCGGCTTCTGCCCCACCTGCGGGACGACCCTGTTCTCG
CGCCGCGGGTCGGCGGGGCGGACGTCGGTGGCTCTCGCGGCCCTGGACGATCCGTCGGCCCTGTCGCCGACCGACCACTT
CTGGGTCGAGAGCCGGGTGGCCTGGCTGAAGCTGGACGATGGCCTGCCGCAGCATCCGCAGGCCGCGCCCTGA

Upstream 100 bases:

>100_bases
TCTGGATCTGCATGCATGAGGCGCTGCGGGGGGCGCCGCGCATGCGGGCGATGTTCGATCACCTGGCGGCCGAGCTCGCC
GGCTATGCTGCGGAGGCGGG

Downstream 100 bases:

>100_bases
CGGCGACGCTCTAGACCTTGATGGGCGAGCGCCAGTTGGCGGGGTCGATGGGCGGGGCGGCGATGTTGCTCGGCCGCTCG
CTCGGGATGGCCAGGAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTAYEGGCFCGRVRFRAEGAPVNVRVCHCRMCQRVTGQPFFARALFATEQVAIEGEPQWFASSDDLSRGFCPTCGTTLFS
RRGSAGRTSVALAALDDPSALSPTDHFWVESRVAWLKLDDGLPQHPQAAP

Sequences:

>Translated_130_residues
MTAYEGGCFCGRVRFRAEGAPVNVRVCHCRMCQRVTGQPFFARALFATEQVAIEGEPQWFASSDDLSRGFCPTCGTTLFS
RRGSAGRTSVALAALDDPSALSPTDHFWVESRVAWLKLDDGLPQHPQAAP
>Mature_129_residues
TAYEGGCFCGRVRFRAEGAPVNVRVCHCRMCQRVTGQPFFARALFATEQVAIEGEPQWFASSDDLSRGFCPTCGTTLFSR
RGSAGRTSVALAALDDPSALSPTDHFWVESRVAWLKLDDGLPQHPQAAP

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14181; Mature: 14050

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYEGGCFCGRVRFRAEGAPVNVRVCHCRMCQRVTGQPFFARALFATEQVAIEGEPQWF
CCCCCCCEEEEEEEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHCEEEECCCCCEE
ASSDDLSRGFCPTCGTTLFSRRGSAGRTSVALAALDDPSALSPTDHFWVESRVAWLKLDD
ECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECC
GLPQHPQAAP
CCCCCCCCCC
>Mature Secondary Structure 
TAYEGGCFCGRVRFRAEGAPVNVRVCHCRMCQRVTGQPFFARALFATEQVAIEGEPQWF
CCCCCCEEEEEEEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHCEEEECCCCCEE
ASSDDLSRGFCPTCGTTLFSRRGSAGRTSVALAALDDPSALSPTDHFWVESRVAWLKLDD
ECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEEEEEECC
GLPQHPQAAP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA