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The map label for this gene is 195979013

Identifier: 195979013

GI number: 195979013

Start: 1985828

End: 1987120

Strand: Direct

Name: 195979013

Synonym: Sez_1923

Alternate gene names: NA

Gene position: 1985828-1987120 (Clockwise)

Preceding gene: 195979007

Following gene: 195979021

Centisome position: 98.11

GC content: 41.45

Gene sequence:

>1293_bases
ATGAAAAGCGCTAAACAACTCATTAGAAAGACTCATATGGAACTCTTTAAGAATACCACAGATTTAGTCGGATTGAAAGA
TAAAAACATCAAAATCCTCTTTGCTTTACGATATCAGACCTATATCGAAATAAGGGCTAGACTAGATTACCAAGCGCCGC
CCTGTCCCCACTGTCAGGGAAAGATGATTAAGTATGATTTCCAAAGATACTCTAAAATCCCACTCCTTGATATCCAAGGC
ATGCCTACTCTCCTCAAACTTAAAAAGCGACGCTTTCAATGCAAATCCTGCCGCAGAGTATCTGTGGCTGAGACACCTCT
CGTTGAGAAAAACTGTCAGATTTCCAAGGAAGTCTGGGCTAAAATAGTGCAGCTACACACCGAAAAACTCACAAACACTG
CTATCGCCCAAAGACTACACATCTCTGTCTCCGCTGTTCAAAGAAAGCTGGAACAATTCACGTTTACTGAAGACTTTTCA
AATCTTCCCGAGGTTCTGTCCTGGGACGAATTCTCTCGAAATAAGGGAAAACTAGCCTTCATCGCCCAGGATTTTGAAAC
ACGACAGATTGTCACCATCCTTGAAAACAACCGGCAAACAACTATCAAAAATCACTTTTATAAGTATCCTAGAAAAGTGC
GGGAACAGGTCAAATTTGTGACCGTGGACATGTCTGGCAGCTACATTCCCATCATCAAACAATTATTTCCTTGCGCCCAA
ATTGTCCTTGATAGGTTTCACATCATTCAACACTTGAGCCGTGCCATGATAACGACCAGAATTGCCATCATGAAGAGCTT
TGACAAGCAATCACTTCCCTATCGCGCCACGAAAAATCACTGGCGAATTTTCCAAAAAGATAGCCGAAAACTGTCTGATA
AGGCCTTCTTTTCAAGGACTTTTAGGCAAACACTGACGCCTCGGGAAATTGTCGATAAAACATTGGCTTTTTCGGATGAG
ATCCGCTATTATTACGACCTTTACCAGCTCCTGCTCTTTCATTTTCAAGAGAAGCGAACAACTGAATTCTTTGGTCTCAT
AGATGACAACATATCATCTGTCAATGCTGCTTTTAAAACTGTCTTTAGGACCTTTACGAAGTACAAGCTACACATCACAA
ACGCTTTGAGCTATCCCTATTCTAATGCTAAATTGGAGGCGACCAACAAGCTCATCAAAGACATCAAACGACAAGCCTTT
GGCTTTCGGAACTTCAAAAACTTAAAAACGAAAATCCTCATCGCTTTGAACATCACAAAAGAGAGAACCAAGCTGACTCT
CTCTCGTTGTTAG

Upstream 100 bases:

>100_bases
TGGGCATTGATTTTGGCTCTATAATTTCTGTAGTGGGTAACTCCACTTTGGAATTTATAGGGCTTTTTGAGTATATCAAA
AAAGTCCCATATGATTTATA

Downstream 100 bases:

>100_bases
TTATAAGTCTCCCACTACAGTTGACAAAGAGCCTTGATTTTTCAATCAAAATAACGAATCAGTGTTTTTTCCGTCAAAAT
ATCTGAATAGGTATAAGACT

Product: transposase IS1193D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKSAKQLIRKTHMELFKNTTDLVGLKDKNIKILFALRYQTYIEIRARLDYQAPPCPHCQGKMIKYDFQRYSKIPLLDIQG
MPTLLKLKKRRFQCKSCRRVSVAETPLVEKNCQISKEVWAKIVQLHTEKLTNTAIAQRLHISVSAVQRKLEQFTFTEDFS
NLPEVLSWDEFSRNKGKLAFIAQDFETRQIVTILENNRQTTIKNHFYKYPRKVREQVKFVTVDMSGSYIPIIKQLFPCAQ
IVLDRFHIIQHLSRAMITTRIAIMKSFDKQSLPYRATKNHWRIFQKDSRKLSDKAFFSRTFRQTLTPREIVDKTLAFSDE
IRYYYDLYQLLLFHFQEKRTTEFFGLIDDNISSVNAAFKTVFRTFTKYKLHITNALSYPYSNAKLEATNKLIKDIKRQAF
GFRNFKNLKTKILIALNITKERTKLTLSRC

Sequences:

>Translated_430_residues
MKSAKQLIRKTHMELFKNTTDLVGLKDKNIKILFALRYQTYIEIRARLDYQAPPCPHCQGKMIKYDFQRYSKIPLLDIQG
MPTLLKLKKRRFQCKSCRRVSVAETPLVEKNCQISKEVWAKIVQLHTEKLTNTAIAQRLHISVSAVQRKLEQFTFTEDFS
NLPEVLSWDEFSRNKGKLAFIAQDFETRQIVTILENNRQTTIKNHFYKYPRKVREQVKFVTVDMSGSYIPIIKQLFPCAQ
IVLDRFHIIQHLSRAMITTRIAIMKSFDKQSLPYRATKNHWRIFQKDSRKLSDKAFFSRTFRQTLTPREIVDKTLAFSDE
IRYYYDLYQLLLFHFQEKRTTEFFGLIDDNISSVNAAFKTVFRTFTKYKLHITNALSYPYSNAKLEATNKLIKDIKRQAF
GFRNFKNLKTKILIALNITKERTKLTLSRC
>Mature_430_residues
MKSAKQLIRKTHMELFKNTTDLVGLKDKNIKILFALRYQTYIEIRARLDYQAPPCPHCQGKMIKYDFQRYSKIPLLDIQG
MPTLLKLKKRRFQCKSCRRVSVAETPLVEKNCQISKEVWAKIVQLHTEKLTNTAIAQRLHISVSAVQRKLEQFTFTEDFS
NLPEVLSWDEFSRNKGKLAFIAQDFETRQIVTILENNRQTTIKNHFYKYPRKVREQVKFVTVDMSGSYIPIIKQLFPCAQ
IVLDRFHIIQHLSRAMITTRIAIMKSFDKQSLPYRATKNHWRIFQKDSRKLSDKAFFSRTFRQTLTPREIVDKTLAFSDE
IRYYYDLYQLLLFHFQEKRTTEFFGLIDDNISSVNAAFKTVFRTFTKYKLHITNALSYPYSNAKLEATNKLIKDIKRQAF
GFRNFKNLKTKILIALNITKERTKLTLSRC

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 50912; Mature: 50912

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAKQLIRKTHMELFKNTTDLVGLKDKNIKILFALRYQTYIEIRARLDYQAPPCPHCQG
CCHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEEEEEHHHHHHHHEEECCCCCCCCCCCC
KMIKYDFQRYSKIPLLDIQGMPTLLKLKKRRFQCKSCRRVSVAETPLVEKNCQISKEVWA
CHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
KIVQLHTEKLTNTAIAQRLHISVSAVQRKLEQFTFTEDFSNLPEVLSWDEFSRNKGKLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCEEE
IAQDFETRQIVTILENNRQTTIKNHFYKYPRKVREQVKFVTVDMSGSYIPIIKQLFPCAQ
EECCCCCHHEEHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH
IVLDRFHIIQHLSRAMITTRIAIMKSFDKQSLPYRATKNHWRIFQKDSRKLSDKAFFSRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FRQTLTPREIVDKTLAFSDEIRYYYDLYQLLLFHFQEKRTTEFFGLIDDNISSVNAAFKT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHH
VFRTFTKYKLHITNALSYPYSNAKLEATNKLIKDIKRQAFGFRNFKNLKTKILIALNITK
HHHHHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEEEECH
ERTKLTLSRC
HHHHEECCCC
>Mature Secondary Structure
MKSAKQLIRKTHMELFKNTTDLVGLKDKNIKILFALRYQTYIEIRARLDYQAPPCPHCQG
CCHHHHHHHHHHHHHHHCCHHHEECCCCCEEEEEEEEHHHHHHHHEEECCCCCCCCCCCC
KMIKYDFQRYSKIPLLDIQGMPTLLKLKKRRFQCKSCRRVSVAETPLVEKNCQISKEVWA
CHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
KIVQLHTEKLTNTAIAQRLHISVSAVQRKLEQFTFTEDFSNLPEVLSWDEFSRNKGKLAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCEEE
IAQDFETRQIVTILENNRQTTIKNHFYKYPRKVREQVKFVTVDMSGSYIPIIKQLFPCAQ
EECCCCCHHEEHHHHCCCCHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHH
IVLDRFHIIQHLSRAMITTRIAIMKSFDKQSLPYRATKNHWRIFQKDSRKLSDKAFFSRT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FRQTLTPREIVDKTLAFSDEIRYYYDLYQLLLFHFQEKRTTEFFGLIDDNISSVNAAFKT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHH
VFRTFTKYKLHITNALSYPYSNAKLEATNKLIKDIKRQAFGFRNFKNLKTKILIALNITK
HHHHHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEEEECH
ERTKLTLSRC
HHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387149 [H]