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The map label for this gene is 195979007

Identifier: 195979007

GI number: 195979007

Start: 1981875

End: 1982477

Strand: Direct

Name: 195979007

Synonym: Sez_1917

Alternate gene names: NA

Gene position: 1981875-1982477 (Clockwise)

Preceding gene: 195979005

Following gene: 195979013

Centisome position: 97.91

GC content: 36.98

Gene sequence:

>603_bases
GTGACATTTTACAAGGAAAAAATAAATTTTTTAGACATAATGTCTACAAGTGTTCAAAAGGAGATAATGATGGATAGCCG
CAAGCAGCAAACCAAGAAGGCCATTCTTAATGCAATGGTGAGCTTACTAAAAACCGAAAGCTTCGATGATGTAACAACCG
TTCAGCTTGCTAAAATGGCAGGCATTAGTCGTTCTAGCTTTTATACTCACTATAAAGACAAATATGAGATGATTGATTAC
TATCAACAAACCTTTTTTCACAAATTAGAATACATTTTTGAAAAAGAATACCAAAACAAGGAGCATGCTTTTTTAGAAGT
ATTTGAATTTCTCAAGCGAGAGCAACTACTATCTGCTCTGCTATCCTCCAATGGTACCCGAGAAATCCAAAGCTTTATCA
TTAACAAGGTTCGTCTGTTGATCACTACCGATCTTCAGGACAAGTTCAGTAAGGACATCTTGTCCCCAACCGAAAAGGAA
TATCGAAGCATCTACCTAGCACATGCCTTTTTCGGTGTCTGCCAAAGCTGGATTGCTAAAGGAAAAAAAGAATCCCCTCA
GGAAATGACTCGTTTCGTCTTAAAAATGCTATCTAAAACATAG

Upstream 100 bases:

>100_bases
TTACGATTTTTGATTATTGCTTTTAATCCTTCTAGCATTATTTTTTCTCCAAATAGACATACTGTTCAAAAATTATGATA
AAATATATTATACAAATAAA

Downstream 100 bases:

>100_bases
TCCTGCACTAAGGATGTCAAATCCAGTACCAAAAAACAACTTTGTAAACTATTTCTTGCTGAGTTTATAGTGATCTTTGT
GCCTAACAATACCGACCTCC

Product: transcriptional regulator TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcription Regulator

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTFYKEKINFLDIMSTSVQKEIMMDSRKQQTKKAILNAMVSLLKTESFDDVTTVQLAKMAGISRSSFYTHYKDKYEMIDY
YQQTFFHKLEYIFEKEYQNKEHAFLEVFEFLKREQLLSALLSSNGTREIQSFIINKVRLLITTDLQDKFSKDILSPTEKE
YRSIYLAHAFFGVCQSWIAKGKKESPQEMTRFVLKMLSKT

Sequences:

>Translated_200_residues
MTFYKEKINFLDIMSTSVQKEIMMDSRKQQTKKAILNAMVSLLKTESFDDVTTVQLAKMAGISRSSFYTHYKDKYEMIDY
YQQTFFHKLEYIFEKEYQNKEHAFLEVFEFLKREQLLSALLSSNGTREIQSFIINKVRLLITTDLQDKFSKDILSPTEKE
YRSIYLAHAFFGVCQSWIAKGKKESPQEMTRFVLKMLSKT
>Mature_199_residues
TFYKEKINFLDIMSTSVQKEIMMDSRKQQTKKAILNAMVSLLKTESFDDVTTVQLAKMAGISRSSFYTHYKDKYEMIDYY
QQTFFHKLEYIFEKEYQNKEHAFLEVFEFLKREQLLSALLSSNGTREIQSFIINKVRLLITTDLQDKFSKDILSPTEKEY
RSIYLAHAFFGVCQSWIAKGKKESPQEMTRFVLKMLSKT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23700; Mature: 23569

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFYKEKINFLDIMSTSVQKEIMMDSRKQQTKKAILNAMVSLLKTESFDDVTTVQLAKMA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GISRSSFYTHYKDKYEMIDYYQQTFFHKLEYIFEKEYQNKEHAFLEVFEFLKREQLLSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LSSNGTREIQSFIINKVRLLITTDLQDKFSKDILSPTEKEYRSIYLAHAFFGVCQSWIAK
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GKKESPQEMTRFVLKMLSKT
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFYKEKINFLDIMSTSVQKEIMMDSRKQQTKKAILNAMVSLLKTESFDDVTTVQLAKMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GISRSSFYTHYKDKYEMIDYYQQTFFHKLEYIFEKEYQNKEHAFLEVFEFLKREQLLSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LSSNGTREIQSFIINKVRLLITTDLQDKFSKDILSPTEKEYRSIYLAHAFFGVCQSWIAK
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
GKKESPQEMTRFVLKMLSKT
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA