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The map label for this gene is sdaAB [H]

Identifier: 195979021

GI number: 195979021

Start: 1995339

End: 1996010

Strand: Direct

Name: sdaAB [H]

Synonym: Sez_1933

Alternate gene names: 195979021

Gene position: 1995339-1996010 (Clockwise)

Preceding gene: 195979013

Following gene: 195979022

Centisome position: 98.58

GC content: 39.29

Gene sequence:

>672_bases
ATGAACACACAAAAATTTCAATCCGTTTTTGACATCATTGGACCAGTGATGATTGGACCATCGAGCAGTCATACCGCTGG
TGCTGTTAGAATCGGAAAGGTTGTCCACTCCATTTTTGGAGAAATTCCTGATGAGGTGACCTTTCATCTATACAATTCAT
TTGCTAAGACCTATCAAGGCCATGGTACCGACAAGGCACTAGTAGCTGGTATTATGGGCATGGATACGGATAATCCAAAC
ATCAAGAATTCTCTTGAAATTGCTCATCAAAAGGGCATTAAAATTTATTGGGATATTTTAAAGGATAGCAATGCTCCCCA
CCCCAATACTGTAAAGATTAGTGTCAAAAAGGCTGATAAAGCAATGAGCATTACAGGTGTGTCAATTGGAGGAGGAAACA
TTCAGGTCACAGAGCTAAATGGTTTTTCTGTTTCCTTGTCTATGAATACTCCAACCTTGATTATTGTCCATCAAGATATC
CCCGGAATGATTGCTAAGGTTACAGATATATTGTCAGCTAGTGATATTAATATCGCTCAAATGACTGTGACTCGTGAAAG
TGCAGGTGAGAAAGCCATTATGATTATTGAGGTTGATTCTCGTGACTGTCAAGCTGCTGTTAAGCAGATTGCAACTATCC
CTAATCTGCATAATGTCAATTTCTTTGACTAG

Upstream 100 bases:

>100_bases
AGTATTGTCTCTTATTTCCAACAATATCTTTTTTCATAACAAACGACATTTGATTAGCGATTTGTTATAATAAAAAGGAT
AAAAAGAGCATGGAGCATAT

Downstream 100 bases:

>100_bases
AAAGGTATGTCATGTTTTACACAATTGAAGAGCTTGTCAAGCAAGCTGATGATAGATTTGATGGTAATGTAGCAGAGCTA
ATGATTGCTACAGAGGTTGA

Product: probable L-serine dehydratase beta chain SdaAB

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNTQKFQSVFDIIGPVMIGPSSSHTAGAVRIGKVVHSIFGEIPDEVTFHLYNSFAKTYQGHGTDKALVAGIMGMDTDNPN
IKNSLEIAHQKGIKIYWDILKDSNAPHPNTVKISVKKADKAMSITGVSIGGGNIQVTELNGFSVSLSMNTPTLIIVHQDI
PGMIAKVTDILSASDINIAQMTVTRESAGEKAIMIIEVDSRDCQAAVKQIATIPNLHNVNFFD

Sequences:

>Translated_223_residues
MNTQKFQSVFDIIGPVMIGPSSSHTAGAVRIGKVVHSIFGEIPDEVTFHLYNSFAKTYQGHGTDKALVAGIMGMDTDNPN
IKNSLEIAHQKGIKIYWDILKDSNAPHPNTVKISVKKADKAMSITGVSIGGGNIQVTELNGFSVSLSMNTPTLIIVHQDI
PGMIAKVTDILSASDINIAQMTVTRESAGEKAIMIIEVDSRDCQAAVKQIATIPNLHNVNFFD
>Mature_223_residues
MNTQKFQSVFDIIGPVMIGPSSSHTAGAVRIGKVVHSIFGEIPDEVTFHLYNSFAKTYQGHGTDKALVAGIMGMDTDNPN
IKNSLEIAHQKGIKIYWDILKDSNAPHPNTVKISVKKADKAMSITGVSIGGGNIQVTELNGFSVSLSMNTPTLIIVHQDI
PGMIAKVTDILSASDINIAQMTVTRESAGEKAIMIIEVDSRDCQAAVKQIATIPNLHNVNFFD

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 24017; Mature: 24017

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQKFQSVFDIIGPVMIGPSSSHTAGAVRIGKVVHSIFGEIPDEVTFHLYNSFAKTYQG
CCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
HGTDKALVAGIMGMDTDNPNIKNSLEIAHQKGIKIYWDILKDSNAPHPNTVKISVKKADK
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCC
AMSITGVSIGGGNIQVTELNGFSVSLSMNTPTLIIVHQDIPGMIAKVTDILSASDINIAQ
EEEEEEEEECCCEEEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEE
MTVTRESAGEKAIMIIEVDSRDCQAAVKQIATIPNLHNVNFFD
EEEECCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNTQKFQSVFDIIGPVMIGPSSSHTAGAVRIGKVVHSIFGEIPDEVTFHLYNSFAKTYQG
CCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
HGTDKALVAGIMGMDTDNPNIKNSLEIAHQKGIKIYWDILKDSNAPHPNTVKISVKKADK
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCC
AMSITGVSIGGGNIQVTELNGFSVSLSMNTPTLIIVHQDIPGMIAKVTDILSASDINIAQ
EEEEEEEEECCCEEEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEE
MTVTRESAGEKAIMIIEVDSRDCQAAVKQIATIPNLHNVNFFD
EEEECCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]