Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 195977924

GI number: 195977924

Start: 828321

End: 828857

Strand: Direct

Name: atpH [H]

Synonym: Sez_0795

Alternate gene names: 195977924

Gene position: 828321-828857 (Clockwise)

Preceding gene: 195977923

Following gene: 195977925

Centisome position: 40.92

GC content: 38.73

Gene sequence:

>537_bases
ATGACCAAAAAAGAACAAGCTCTTATCGAGCAATATGCAAAAAGTCTTGTGCAGGTCTGTCAGGAGCGAGACACTCTTGA
AGCACTGCAGGCTGATGTGCTTGCCATTTTAGAGGTTTTTAAAGCTACTAATCTTGCTAAGACCTTGTCAAGCTTAGCTG
TTCCACGTGCTAAAAAGCTTGAGCTAGTAAGGCAGCTTCAAGGAGATAATATCATTTATCTGAATAATTTTTTAGAAGTT
ATGCTGCAAAATGAGCGTGAAGCTTATTTATATCAGGTGCTTCTAAGGGTTTTATCCGAGCTGGCTAGTGTCTCAAATCA
ATATGACGTGACAGTTACGTCAGCAGTTCCTTTAAGTGAGGAACAAAAGCAGCGCGTGCGTACAGTGGTTTCAAAGAGAC
TTGCAGTAAAGACAGGTCGCTTAATCGAAAAGGTAGATCCTTCGTTAATTGGAGGATTTATGATTAGCGTCAATAATAAG
GTAATTGATACAAGCATTCGTCGTCAATTACAAGCATTTAAAATGAATTTAAAATAG

Upstream 100 bases:

>100_bases
TGACAGTTTTACTAGCAGAAAAAATTATGGGAGCCAATCTTGATAAGGCGGCTCAAAGCCAGCTTATTGATCGCTATCTT
GATGACTTAGGAGAGGCTTA

Downstream 100 bases:

>100_bases
AAAGTGGTGTGACTTTTGGCAATTAATGCACAAGAAATTAGCGCTTTAATTAAAAAGCAAATTGAGAACTTCCAGCCAAA
TTTCGATGTCACAGAAACTG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTKKEQALIEQYAKSLVQVCQERDTLEALQADVLAILEVFKATNLAKTLSSLAVPRAKKLELVRQLQGDNIIYLNNFLEV
MLQNEREAYLYQVLLRVLSELASVSNQYDVTVTSAVPLSEEQKQRVRTVVSKRLAVKTGRLIEKVDPSLIGGFMISVNNK
VIDTSIRRQLQAFKMNLK

Sequences:

>Translated_178_residues
MTKKEQALIEQYAKSLVQVCQERDTLEALQADVLAILEVFKATNLAKTLSSLAVPRAKKLELVRQLQGDNIIYLNNFLEV
MLQNEREAYLYQVLLRVLSELASVSNQYDVTVTSAVPLSEEQKQRVRTVVSKRLAVKTGRLIEKVDPSLIGGFMISVNNK
VIDTSIRRQLQAFKMNLK
>Mature_177_residues
TKKEQALIEQYAKSLVQVCQERDTLEALQADVLAILEVFKATNLAKTLSSLAVPRAKKLELVRQLQGDNIIYLNNFLEVM
LQNEREAYLYQVLLRVLSELASVSNQYDVTVTSAVPLSEEQKQRVRTVVSKRLAVKTGRLIEKVDPSLIGGFMISVNNKV
IDTSIRRQLQAFKMNLK

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20166; Mature: 20035

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKEQALIEQYAKSLVQVCQERDTLEALQADVLAILEVFKATNLAKTLSSLAVPRAKKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ELVRQLQGDNIIYLNNFLEVMLQNEREAYLYQVLLRVLSELASVSNQYDVTVTSAVPLSE
HHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH
EQKQRVRTVVSKRLAVKTGRLIEKVDPSLIGGFMISVNNKVIDTSIRRQLQAFKMNLK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKKEQALIEQYAKSLVQVCQERDTLEALQADVLAILEVFKATNLAKTLSSLAVPRAKKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ELVRQLQGDNIIYLNNFLEVMLQNEREAYLYQVLLRVLSELASVSNQYDVTVTSAVPLSE
HHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH
EQKQRVRTVVSKRLAVKTGRLIEKVDPSLIGGFMISVNNKVIDTSIRRQLQAFKMNLK
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA