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The map label for this gene is atpF

Identifier: 195977923

GI number: 195977923

Start: 827827

End: 828321

Strand: Direct

Name: atpF

Synonym: Sez_0794

Alternate gene names: 195977923

Gene position: 827827-828321 (Clockwise)

Preceding gene: 195977922

Following gene: 195977924

Centisome position: 40.9

GC content: 45.45

Gene sequence:

>495_bases
ATGTCAGTTACAATTGGTGAGCTCATTGGGAATTTTATTCTGGTAACAGGCTCTGTCATCGTCTTGTTGCTCTTGATTAA
AGCCTTTGCTTGGGGTGCTATCGAAGCTGTTTTACAGGCACGCTCACAGCAAATTTCACAGGATATTGACCAAGCAGAGC
AGGCGCGTCTCAACGCCCAGCAGCTTGAAAAGGAAGGTCAAGCCAATTTAGAAGCCAGCAGATCAGAGGCTAGCCAGATT
GTTGAGGCAGCCAAAGAAACTGGTAAAGCACAGGAGACACGCATTGTAGCAGAGGCTACAGAAGAGGCCGATCGCCTAAA
AGCAGTAGCATTGACAGATATCGAACACAGCAAGTCAGAGGCTATTTCAGCCGTTAAGACAGAAATGTCAGATTTGACAG
TTTTACTAGCAGAAAAAATTATGGGAGCCAATCTTGATAAGGCGGCTCAAAGCCAGCTTATTGATCGCTATCTTGATGAC
TTAGGAGAGGCTTAA

Upstream 100 bases:

>100_bases
TTATTTCCTGCATACAAGCCTTTGTATTTACAAAATTAACAGCAACGTATTTAGGAAAAAAAGTTAATGAATCAGAAGAA
TAAGAAGGGAGGACAAACGA

Downstream 100 bases:

>100_bases
TGACCAAAAAAGAACAAGCTCTTATCGAGCAATATGCAAAAAGTCTTGTGCAGGTCTGTCAGGAGCGAGACACTCTTGAA
GCACTGCAGGCTGATGTGCT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSVTIGELIGNFILVTGSVIVLLLLIKAFAWGAIEAVLQARSQQISQDIDQAEQARLNAQQLEKEGQANLEASRSEASQI
VEAAKETGKAQETRIVAEATEEADRLKAVALTDIEHSKSEAISAVKTEMSDLTVLLAEKIMGANLDKAAQSQLIDRYLDD
LGEA

Sequences:

>Translated_164_residues
MSVTIGELIGNFILVTGSVIVLLLLIKAFAWGAIEAVLQARSQQISQDIDQAEQARLNAQQLEKEGQANLEASRSEASQI
VEAAKETGKAQETRIVAEATEEADRLKAVALTDIEHSKSEAISAVKTEMSDLTVLLAEKIMGANLDKAAQSQLIDRYLDD
LGEA
>Mature_163_residues
SVTIGELIGNFILVTGSVIVLLLLIKAFAWGAIEAVLQARSQQISQDIDQAEQARLNAQQLEKEGQANLEASRSEASQIV
EAAKETGKAQETRIVAEATEEADRLKAVALTDIEHSKSEAISAVKTEMSDLTVLLAEKIMGANLDKAAQSQLIDRYLDDL
GEA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_STREM (B4U2D7)

Other databases:

- EMBL:   CP001129
- RefSeq:   YP_002123167.1
- EnsemblBacteria:   EBSTRT00000009831
- GeneID:   6761457
- GenomeReviews:   CP001129_GR
- KEGG:   sez:Sez_0794
- GeneTree:   EBGT00050000027998
- HOGENOM:   HBG617328
- OMA:   QETRIVA
- ProtClustDB:   PRK05759
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17649; Mature: 17518

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x40db253c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTIGELIGNFILVTGSVIVLLLLIKAFAWGAIEAVLQARSQQISQDIDQAEQARLNAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QLEKEGQANLEASRSEASQIVEAAKETGKAQETRIVAEATEEADRLKAVALTDIEHSKSE
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISAVKTEMSDLTVLLAEKIMGANLDKAAQSQLIDRYLDDLGEA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SVTIGELIGNFILVTGSVIVLLLLIKAFAWGAIEAVLQARSQQISQDIDQAEQARLNAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QLEKEGQANLEASRSEASQIVEAAKETGKAQETRIVAEATEEADRLKAVALTDIEHSKSE
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISAVKTEMSDLTVLLAEKIMGANLDKAAQSQLIDRYLDDLGEA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA