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The map label for this gene is arcD [C]

Identifier: 195977709

GI number: 195977709

Start: 596917

End: 598410

Strand: Direct

Name: arcD [C]

Synonym: Sez_0571

Alternate gene names: 195977709

Gene position: 596917-598410 (Clockwise)

Preceding gene: 195977708

Following gene: 195977710

Centisome position: 29.49

GC content: 42.03

Gene sequence:

>1494_bases
ATGACAGAAGAAAAAAAACGAGGTTTTAAAATTCCTTCTTCTTACACTGTTTTGTTTATCATCATTGCTATTATGGCAGT
ATTAACCTGGTTTATTCCAGCTGGTGCTTATGAGACTGCTAAGGATGGCGGTGTGATTTCAGGGACCTACCAAACGGTTA
AGTCAAACCCTCAGGGTATTTTTGACATCTTAATGGCGCCTGTTCGTGGTATGTTAGGGGTTAAAGGAACCGAGGGAGCG
ATTCAAGTGTCTTTCTTTATCCTAATGGTTGGTGGCTTTTTAGGGGTTGTCAACAAGACAGGTGCTCTAGACACAGGGAT
TGCCTCTGTTGTCCGTAAAAACAAGGGCAGAGAAAAATTCTTGATTGCAATTTTGATTCCTTTGTTTGCACTTGGTGGCA
CAACCTACGGAATGGGAGAAGAAACAATGGCGTTTTACCCTCTTCTTATTCCGGTAATGATTGCGGTTGGCTTTGATAGC
ATTGTTGCAGTAGCTATTATCCTGATTGGTTCACAGATTGGCTGTTTGGCTTCAACCATCAATCCCTTTGCTACTGGAGT
GGCAGCAGATGCAGCTGGTGTTAGTATCGCAGATGGTATGATTTGGCGGATTATCCAATGGTTTATCCTTGTTGGTATGT
CTATCTGGTTTGTTTACAGTTACGCTAGCAAGATTGAAAAAGACCCAAGCAAATCTCTTGTGGCAGATAAGGCCGAAGAG
CATAAGGAATTCTTCCAATTACAAAATTCTGGCGAGGATTTGACTAGTCGTCAACGAAAGGTTTTAGCTATCTTTACCTT
GACATTTGTCATCATGATTCTTAGCTTGATTCCTTGGGAAGATTTTGGCATTAAGCTGTTTACAAATATCAATACTTGGC
TAACAACAACACCTGTTTTAGGTGGTATTATTGGTAAAACAATGGGAGCCTTTGGAACCTGGTATTTCCCAGAAATTACC
ATGCTCTTTATCATGATGGGTGTTTTAGTGGCTATTGTTTATCGCATGTCTGAGGACGATTTCTTCTCAGCCTTTCTAAG
TGGTGCAGGTGAATTCCTTGGTGTTGCGATTATTTGTGCGGTAGCGCGTGGTATCCAAGTGATTATGAACGGTGGTATGA
TTACTGCGACCATTCTCCATTGGGGTGAGACAGGGCTAGCAGGCTTGTCATCACAGGTCTTTGTTATCCTGGCTTATATC
TTCTATTTGCCAATGTCCTTCTTGATTCCATCAACCTCAGGGCTTGCTGGTGCAACTATGGGAATCATGGCACCGCTTGG
ACAATTCTCAAATGTTCCTGCTCACTTGGTTATCACAGCCTTCCAATCAGCATCAGGTATCTTAAACATGATTTCACCAA
CCTCTGCTATTGTTATGGGGGCGCTTGCGCTTGGACGTATTGATCTAGGTACTTGGTGGAAATTTATCGGCAAGTTTATC
GTTATGGTAATGCTTGTTAGTGTTCTGCTATTAGTAGTAGCGACATTCTTTTAA

Upstream 100 bases:

>100_bases
AAAAAACGTACTTTAACTACATGACGAGTCGTTCTGGTTCTCGTGTCCTTGACCGGAACTGGGACGGCTTATTTTTATGA
AAAGGTAAGAGGTAATCACT

Downstream 100 bases:

>100_bases
GAGATAGGAGGCTTCTATGGAAACCTATATCCAATCAAGACACCAAGAGGCTTGTGTGGCTGCGATTAAAAAAATAGTGT
CTTACCCTTCTGTGCTAAAT

Product: arginine/ornithine antiporter ArcD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTEEKKRGFKIPSSYTVLFIIIAIMAVLTWFIPAGAYETAKDGGVISGTYQTVKSNPQGIFDILMAPVRGMLGVKGTEGA
IQVSFFILMVGGFLGVVNKTGALDTGIASVVRKNKGREKFLIAILIPLFALGGTTYGMGEETMAFYPLLIPVMIAVGFDS
IVAVAIILIGSQIGCLASTINPFATGVAADAAGVSIADGMIWRIIQWFILVGMSIWFVYSYASKIEKDPSKSLVADKAEE
HKEFFQLQNSGEDLTSRQRKVLAIFTLTFVIMILSLIPWEDFGIKLFTNINTWLTTTPVLGGIIGKTMGAFGTWYFPEIT
MLFIMMGVLVAIVYRMSEDDFFSAFLSGAGEFLGVAIICAVARGIQVIMNGGMITATILHWGETGLAGLSSQVFVILAYI
FYLPMSFLIPSTSGLAGATMGIMAPLGQFSNVPAHLVITAFQSASGILNMISPTSAIVMGALALGRIDLGTWWKFIGKFI
VMVMLVSVLLLVVATFF

Sequences:

>Translated_497_residues
MTEEKKRGFKIPSSYTVLFIIIAIMAVLTWFIPAGAYETAKDGGVISGTYQTVKSNPQGIFDILMAPVRGMLGVKGTEGA
IQVSFFILMVGGFLGVVNKTGALDTGIASVVRKNKGREKFLIAILIPLFALGGTTYGMGEETMAFYPLLIPVMIAVGFDS
IVAVAIILIGSQIGCLASTINPFATGVAADAAGVSIADGMIWRIIQWFILVGMSIWFVYSYASKIEKDPSKSLVADKAEE
HKEFFQLQNSGEDLTSRQRKVLAIFTLTFVIMILSLIPWEDFGIKLFTNINTWLTTTPVLGGIIGKTMGAFGTWYFPEIT
MLFIMMGVLVAIVYRMSEDDFFSAFLSGAGEFLGVAIICAVARGIQVIMNGGMITATILHWGETGLAGLSSQVFVILAYI
FYLPMSFLIPSTSGLAGATMGIMAPLGQFSNVPAHLVITAFQSASGILNMISPTSAIVMGALALGRIDLGTWWKFIGKFI
VMVMLVSVLLLVVATFF
>Mature_496_residues
TEEKKRGFKIPSSYTVLFIIIAIMAVLTWFIPAGAYETAKDGGVISGTYQTVKSNPQGIFDILMAPVRGMLGVKGTEGAI
QVSFFILMVGGFLGVVNKTGALDTGIASVVRKNKGREKFLIAILIPLFALGGTTYGMGEETMAFYPLLIPVMIAVGFDSI
VAVAIILIGSQIGCLASTINPFATGVAADAAGVSIADGMIWRIIQWFILVGMSIWFVYSYASKIEKDPSKSLVADKAEEH
KEFFQLQNSGEDLTSRQRKVLAIFTLTFVIMILSLIPWEDFGIKLFTNINTWLTTTPVLGGIIGKTMGAFGTWYFPEITM
LFIMMGVLVAIVYRMSEDDFFSAFLSGAGEFLGVAIICAVARGIQVIMNGGMITATILHWGETGLAGLSSQVFVILAYIF
YLPMSFLIPSTSGLAGATMGIMAPLGQFSNVPAHLVITAFQSASGILNMISPTSAIVMGALALGRIDLGTWWKFIGKFIV
MVMLVSVLLLVVATFF

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=511, Percent_Identity=28.5714285714286, Blast_Score=192, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 53481; Mature: 53350

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TEEKKRGFKIPSSYTVLFIIIAIMAVLTWFIPAGAYETAKDGGVISGTYQTVKSNPQGI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCCHH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HHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]