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The map label for this gene is ytjP [H]

Identifier: 195977710

GI number: 195977710

Start: 598427

End: 599758

Strand: Direct

Name: ytjP [H]

Synonym: Sez_0572

Alternate gene names: 195977710

Gene position: 598427-599758 (Clockwise)

Preceding gene: 195977709

Following gene: 195977711

Centisome position: 29.56

GC content: 44.67

Gene sequence:

>1332_bases
ATGGAAACCTATATCCAATCAAGACACCAAGAGGCTTGTGTGGCTGCGATTAAAAAAATAGTGTCTTACCCTTCTGTGCT
AAATGAGGGGGAAAATGGCACACCCTTTGGTCAAGCTATTCAAGATGTTCTTGAAGCAACCTTAGCCTTATGCCAAGACC
TTGGTTTTAAAACTTATATTGATCCTAAAGGCTATTATGGCTATGCTGAATTAGGTGATCAAACAGAGGTGCTTGCTATT
CTTTGTCACTTAGATGTGGTGCCTACTGGTGATTTGAAGCTATGGCATACAGATCCCTTTACTTGTATTGAAAAAGATGG
CTGCTTGTACGGACGTGGCACTCAAGATGACAAGGGGCCTTCGATGATGGCACTCTTTGCCACTAAAGCACTTATGGACG
CTGGTGTGGTCTTTAACAAACGCATTCGCTTTATCTTTGGAACAGACGAAGAAACCCTCTGGCGCTGTATGAACCGTTAT
AATGAAGTAGAAGAGGAGGCAACCTTTGGTTTTGCCCCAGACTCAAGCTTTCCATTGACCTATGCTGAAAAAGGGCTTTT
ACAAGCCAAGCTAGTTGGTAAGGGGTCGGCTAGACTCAATCTTGAGGTTGGTCAGGCCTATAATGTCGTTCCAGCCAGAG
CTTCTTATCAGGGAGACAAGCTAGAGGCTTTAGGTGAAGAGCTTGATAGGCTTGGCTTTGAATATGTTGTCAAAGATGGT
GAGCTAACCGTCTATGGACTTGCTCAGCATGCTAAGGACGCTCCAGACGGGATTAACGCCCTTATCAGACTTGCAAAGGC
TCTTGTAGTGCTTGAGCCAGAGCCAGTCCTTGACTTTCTTGCTCATGTGGTTAACGAAGATGGCAGAGCAGTCAATATTT
TTGGTCCAGTTCAGGACGAGCCATCAGGAGGGCTTAGCTTCAACGTAGCTGGTCTTACCTTAACAAAAGAGATGACAGAG
ATTCGTTTGGACATTCGGATTCCGGTCTTAGCAGATAAAGATACCTTAGTAGACCAGTTAAGCCAAAAAGCGCAGGACTA
CGGTCTAGCTTACGAGGAATTTGATTATTTGGCACCCTTATATGTGCCTTTGGACAGCGAGCTAGTAACTACCTTGTTAG
AGGTATATCGTGAAAAAACAGGGGATCAATCGCCAGCCCAATCATCAGGTGGAGCAACCTTTGCTCGTACAATGGCTAAT
TGTGTGGCCTTTGGAGCATTATTTCCTGATGCTGTTCAAACAGAACACCAAGAAAATGAACATATCGTCTTAGCAGATGC
CTATCGTGCAATGGATATTTACGCGGAAGCCATCTACCGACTAACACGATAA

Upstream 100 bases:

>100_bases
ACTTGGTGGAAATTTATCGGCAAGTTTATCGTTATGGTAATGCTTGTTAGTGTTCTGCTATTAGTAGTAGCGACATTCTT
TTAAGAGATAGGAGGCTTCT

Downstream 100 bases:

>100_bases
GATGAGGAGTATCATATATGACAAAACAAAAAATTGTTGTCGCACTTGGAGGAAATGCAATCCTCTCAACAGACGCGTCA
GCTAAGGCACAACAAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYIDPKGYYGYAELGDQTEVLAI
LCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGPSMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRY
NEVEEEATFGFAPDSSFPLTYAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDG
ELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDEPSGGLSFNVAGLTLTKEMTE
IRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPLYVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMAN
CVAFGALFPDAVQTEHQENEHIVLADAYRAMDIYAEAIYRLTR

Sequences:

>Translated_443_residues
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYIDPKGYYGYAELGDQTEVLAI
LCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGPSMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRY
NEVEEEATFGFAPDSSFPLTYAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDG
ELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDEPSGGLSFNVAGLTLTKEMTE
IRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPLYVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMAN
CVAFGALFPDAVQTEHQENEHIVLADAYRAMDIYAEAIYRLTR
>Mature_443_residues
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYIDPKGYYGYAELGDQTEVLAI
LCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGPSMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRY
NEVEEEATFGFAPDSSFPLTYAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDG
ELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDEPSGGLSFNVAGLTLTKEMTE
IRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPLYVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMAN
CVAFGALFPDAVQTEHQENEHIVLADAYRAMDIYAEAIYRLTR

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fifth step. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.4.13.3

Molecular weight: Translated: 48835; Mature: 48835

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYI
CCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
DPKGYYGYAELGDQTEVLAILCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGP
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCEEECCCCCCCCCC
SMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRYNEVEEEATFGFAPDSSFPLT
HHHHHHHHHHHHHHCCEEECEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
YAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDG
HHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
ELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDE
CEEEEEEHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCEEEEECCCCCC
PSGGLSFNVAGLTLTKEMTEIRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPL
CCCCEEEEEEEEEEEHHHHHEEEEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCE
YVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMANCVAFGALFPDAVQTEHQENE
EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
HIVLADAYRAMDIYAEAIYRLTR
EEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYI
CCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
DPKGYYGYAELGDQTEVLAILCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGP
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCEEECCCCCCCCCC
SMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRYNEVEEEATFGFAPDSSFPLT
HHHHHHHHHHHHHHCCEEECEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
YAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDG
HHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECC
ELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDE
CEEEEEEHHHCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCEEEEECCCCCC
PSGGLSFNVAGLTLTKEMTEIRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPL
CCCCEEEEEEEEEEEHHHHHEEEEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCE
YVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMANCVAFGALFPDAVQTEHQENE
EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
HIVLADAYRAMDIYAEAIYRLTR
EEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]