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The map label for this gene is omp85 [H]

Identifier: 195953011

GI number: 195953011

Start: 569257

End: 571584

Strand: Direct

Name: omp85 [H]

Synonym: HY04AAS1_0636

Alternate gene names: 195953011

Gene position: 569257-571584 (Clockwise)

Preceding gene: 195953010

Following gene: 195953012

Centisome position: 36.5

GC content: 34.88

Gene sequence:

>2328_bases
ATGAAGAAAGTATTTTTATTTATATTGCTGTTAGTATCGCTTGGTTTTTCCCAAACTATATCAAAAATAGAAGTTGTTGG
AAATAAGTATATACAGTCGGGTCTTGTTAAGGGATTCATGAAACTTCATCCAGGCATGCAATTTTCGCAAACCATGCTGG
ACGAAGACATAAAAAGATTATATGAAACTGGATATTTCAAAAATATAGCAGTAAAAGAAATAAAAAAGGACGATCATGTA
AAACTTATATATATTGTACAAGATTTGCCAATTATATATCGTATAGAATTTAAAGGCAACAAAAGACTAAGCTCCAAGGA
TCTTGCCAAAAAGCTTGGCATAGAAACAGAGGTAGGAAAATTTGGTTTAAATCAAGCCACTAGAGGTTTAACGCCGTCTT
CCAGCATAAATGAAAAGATAGAAATTATAAAACAATTCCAATTAGGAAAAGTCCTAAGCGAAGAACAAATCCACGAGCTT
ATAAACCGTATCAAAAAAGCCTATGAAGAAGCCGGATACTCTCATGTGGGTGTAACCTATAAGATAATACCCGTTAAAGG
GGCATCAAGATTAGTATTTTACATAAAGGAAACAAAGCCTACCTATGTAGATGATATTCATTTTATAGGTAACAAGACTT
TTAGCGACGGTAGACTTTTAGATCATATGAAAACGCAACCCTTTAGTCTATTAGCTTTTAGATGGCACCCCCCCTTCAAC
AAACATATACTCATGGATGATATAAAAAGACTGAAAAAATTTTATGAAAATGAAGGTTTTTTTGAAGTTCAAATAGACAA
ACCTATTATTAAAAAGCATGGACACTGGGTAAATATAACAATAAAAATACACGAAGGTTCGAGATATAAAATAGGCAAAA
TAGTTTTCAAAGGAAACAAAATGTATTCTGAAAGTGAGCTATTGGATAAGATAATACAACACAGAGATAGCAAGAGATAT
TATAAAAAATCTATAATAAAGCTTATAGAAAAAAGAATATTTGACAAATATGGCAAGACAGGTTTCATCAACGAATACAC
CAGCGTAAAAAAGGAAACAAATTTTAAAAATAAAACTGTTAACTTATTTTTTCATGTTTATGAAGGTGGTCCAGTATACG
CTGGTAAAATCCATATACGAGGAAATTATGAAACGAGAGACTATGTTATAAGAAGAGAAATGAGGGTCCAAGAGTACGAC
CTTATCACAAGACACGAACTAAGTAGATCAAAGGACCGTATAATGAACTTAGGCTACTATGACAACGTACAAATAGTGCC
TGTACCAAAACCAGATAATTTTGACGATATATATACAAAAATCCAAGAAAGGTATACAGGCCAGTTCTCAGTGGGTCTTG
GCTACAACCAGGTAACTGGTCTAGCCGGATTTGCGTCCATTAGAAAAGGTAATTTCCTAGGTACTGGCGATATAGCCGGC
ATATCCTTATCTTACGGTGCAAACTACGAAAACGATTCAATAAGTTATACCCATAAATGGTTGTTTAACAAACCAATAGA
TGTAACTGGATCACTATACGATACAAAGATCTACTATATAGACTACACCGTTCAAAGAGTTGGCTTTGACTTAACCTTTA
CAAAAGAGTTTGGTGAATATTGGTATGCAAGCTTAGGCTCGAGCATACAAAAAGTAACATATTCTGATATATCATCTTCG
ACTCCGCCGGTAATCCAATCACAAGCAGGCACTTGGCAAGCAAGAAAGTTAATATTTTCGGTTTCTCACAACACCACAAA
CTACTATTTATTCCCTTCAAAGGGATCTATTCAATCTTTAACATACACAATCGCTTTACCGGTGCTTGGTGGTAGTGAAA
AATTCCAAAAAATAGTGCTTTCAAACGCAAACTTTATAAAAGACCATATATTCTATACTGGTACAATATTCTCGGCAAGA
GAGACTATTGGTTGGGCTCAAGCATATTCCAATTCGGTTGTACCTTTAGACGATGAGTTCTTTGTAGGTGGTGACTATAC
GATAAGAGGTTATAGCTATGGTTACGCTGGTCCTCTTGACTCAGCAGATGAACCAATAGGTGCTACAAGGGAAATTGTAC
TAAACTTTGAAGCAGATTATCCTTTATACAAAAATATTTTTTACGTAGATGCCTTTTACGATACTGGTAGAGGTGCAGAT
TCTTGGTCTGGTCTAAGACCAAGCAAATGGCTTGGAAGCTATGGTGTAGGTATAAGATTTATAACCTCTTATGCGCCAGT
GAGACTCGACCTTGCTTTTAAAACAAAGCCGGTTCCAGGAGATACCGCAAGAGAAAAAATATCTTTTGTGCTTGGATCGT
TTTTCTAA

Upstream 100 bases:

>100_bases
TTTTAAAACATTCGCTGGTACAATATAAAAATGGTGAGCTTAGCTTAAGCTACAAAGAGGTAGATACAAGCATTTATAAA
CTGGAGGAGAGAAAGTACTG

Downstream 100 bases:

>100_bases
GATATTATACGCCCTGGGCAGGAGTCGAACCCGCAACCTTGGGATCCGTAGTCCCATGCTCTATCCAATTGAGCTACCAG
GGCTAATAACATATTATAGC

Product: outer membrane protein assembly complex, YaeT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MKKVFLFILLLVSLGFSQTISKIEVVGNKYIQSGLVKGFMKLHPGMQFSQTMLDEDIKRLYETGYFKNIAVKEIKKDDHV
KLIYIVQDLPIIYRIEFKGNKRLSSKDLAKKLGIETEVGKFGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHEL
INRIKKAYEEAGYSHVGVTYKIIPVKGASRLVFYIKETKPTYVDDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
KHILMDDIKRLKKFYENEGFFEVQIDKPIIKKHGHWVNITIKIHEGSRYKIGKIVFKGNKMYSESELLDKIIQHRDSKRY
YKKSIIKLIEKRIFDKYGKTGFINEYTSVKKETNFKNKTVNLFFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYD
LITRHELSRSKDRIMNLGYYDNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
ISLSYGANYENDSISYTHKWLFNKPIDVTGSLYDTKIYYIDYTVQRVGFDLTFTKEFGEYWYASLGSSIQKVTYSDISSS
TPPVIQSQAGTWQARKLIFSVSHNTTNYYLFPSKGSIQSLTYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSAR
ETIGWAQAYSNSVVPLDDEFFVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFEADYPLYKNIFYVDAFYDTGRGAD
SWSGLRPSKWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF

Sequences:

>Translated_775_residues
MKKVFLFILLLVSLGFSQTISKIEVVGNKYIQSGLVKGFMKLHPGMQFSQTMLDEDIKRLYETGYFKNIAVKEIKKDDHV
KLIYIVQDLPIIYRIEFKGNKRLSSKDLAKKLGIETEVGKFGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHEL
INRIKKAYEEAGYSHVGVTYKIIPVKGASRLVFYIKETKPTYVDDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
KHILMDDIKRLKKFYENEGFFEVQIDKPIIKKHGHWVNITIKIHEGSRYKIGKIVFKGNKMYSESELLDKIIQHRDSKRY
YKKSIIKLIEKRIFDKYGKTGFINEYTSVKKETNFKNKTVNLFFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYD
LITRHELSRSKDRIMNLGYYDNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
ISLSYGANYENDSISYTHKWLFNKPIDVTGSLYDTKIYYIDYTVQRVGFDLTFTKEFGEYWYASLGSSIQKVTYSDISSS
TPPVIQSQAGTWQARKLIFSVSHNTTNYYLFPSKGSIQSLTYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSAR
ETIGWAQAYSNSVVPLDDEFFVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFEADYPLYKNIFYVDAFYDTGRGAD
SWSGLRPSKWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF
>Mature_775_residues
MKKVFLFILLLVSLGFSQTISKIEVVGNKYIQSGLVKGFMKLHPGMQFSQTMLDEDIKRLYETGYFKNIAVKEIKKDDHV
KLIYIVQDLPIIYRIEFKGNKRLSSKDLAKKLGIETEVGKFGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHEL
INRIKKAYEEAGYSHVGVTYKIIPVKGASRLVFYIKETKPTYVDDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
KHILMDDIKRLKKFYENEGFFEVQIDKPIIKKHGHWVNITIKIHEGSRYKIGKIVFKGNKMYSESELLDKIIQHRDSKRY
YKKSIIKLIEKRIFDKYGKTGFINEYTSVKKETNFKNKTVNLFFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYD
LITRHELSRSKDRIMNLGYYDNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
ISLSYGANYENDSISYTHKWLFNKPIDVTGSLYDTKIYYIDYTVQRVGFDLTFTKEFGEYWYASLGSSIQKVTYSDISSS
TPPVIQSQAGTWQARKLIFSVSHNTTNYYLFPSKGSIQSLTYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSAR
ETIGWAQAYSNSVVPLDDEFFVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFEADYPLYKNIFYVDAFYDTGRGAD
SWSGLRPSKWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=866, Percent_Identity=23.4411085450346, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1790666, Length=402, Percent_Identity=24.1293532338308, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 88934; Mature: 88934

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFLFILLLVSLGFSQTISKIEVVGNKYIQSGLVKGFMKLHPGMQFSQTMLDEDIKRL
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YETGYFKNIAVKEIKKDDHVKLIYIVQDLPIIYRIEFKGNKRLSSKDLAKKLGIETEVGK
HHCCCCCCCHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCC
FGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHELINRIKKAYEEAGYSHVGVTY
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECEEE
KIIPVKGASRLVFYIKETKPTYVDDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
EEEEECCCCEEEEEEECCCCCEECCEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCC
KHILMDDIKRLKKFYENEGFFEVQIDKPIIKKHGHWVNITIKIHEGSRYKIGKIVFKGNK
CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCEEEEEEEEECCCCEEEEEEEEECCC
MYSESELLDKIIQHRDSKRYYKKSIIKLIEKRIFDKYGKTGFINEYTSVKKETNFKNKTV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEE
NLFFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYDLITRHELSRSKDRIMNLGYY
EEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC
DNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCE
ISLSYGANYENDSISYTHKWLFNKPIDVTGSLYDTKIYYIDYTVQRVGFDLTFTKEFGEY
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEHHHCCEEEEEHHHHHH
WYASLGSSIQKVTYSDISSSTPPVIQSQAGTWQARKLIFSVSHNTTNYYLFPSKGSIQSL
HHHHHCCHHHEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCEE
TYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSARETIGWAQAYSNSVVPLDDEF
EEEEEEEECCCHHHHHHHHHCCCCHHHHHEEEEEEEEEHHHHHHHHHHHCCCCCCCCCCE
FVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFEADYPLYKNIFYVDAFYDTGRGAD
EECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCEEEEEEEECCCCCCC
SWSGLRPSKWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF
CCCCCCCHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVFLFILLLVSLGFSQTISKIEVVGNKYIQSGLVKGFMKLHPGMQFSQTMLDEDIKRL
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YETGYFKNIAVKEIKKDDHVKLIYIVQDLPIIYRIEFKGNKRLSSKDLAKKLGIETEVGK
HHCCCCCCCHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCC
FGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHELINRIKKAYEEAGYSHVGVTY
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECEEE
KIIPVKGASRLVFYIKETKPTYVDDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
EEEEECCCCEEEEEEECCCCCEECCEEEECCCCCCCCCHHHHHCCCCCEEEEEEECCCCC
KHILMDDIKRLKKFYENEGFFEVQIDKPIIKKHGHWVNITIKIHEGSRYKIGKIVFKGNK
CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCEEEEEEEEECCCCEEEEEEEEECCC
MYSESELLDKIIQHRDSKRYYKKSIIKLIEKRIFDKYGKTGFINEYTSVKKETNFKNKTV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEE
NLFFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYDLITRHELSRSKDRIMNLGYY
EEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC
DNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCE
ISLSYGANYENDSISYTHKWLFNKPIDVTGSLYDTKIYYIDYTVQRVGFDLTFTKEFGEY
EEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEHHHCCEEEEEHHHHHH
WYASLGSSIQKVTYSDISSSTPPVIQSQAGTWQARKLIFSVSHNTTNYYLFPSKGSIQSL
HHHHHCCHHHEEEHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCEE
TYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSARETIGWAQAYSNSVVPLDDEF
EEEEEEEECCCHHHHHHHHHCCCCHHHHHEEEEEEEEEHHHHHHHHHHHCCCCCCCCCCE
FVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFEADYPLYKNIFYVDAFYDTGRGAD
EECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCEEEEEEEECCCCCCC
SWSGLRPSKWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF
CCCCCCCHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]