Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195953004

Identifier: 195953004

GI number: 195953004

Start: 561646

End: 561945

Strand: Direct

Name: 195953004

Synonym: HY04AAS1_0629

Alternate gene names: NA

Gene position: 561646-561945 (Clockwise)

Preceding gene: 195953003

Following gene: 195953006

Centisome position: 36.01

GC content: 32.0

Gene sequence:

>300_bases
ATGAGTAGGATAGAAGGAGATATCACTAGAAACGCTGGGCTAGATACTTCTATTGCAAAGAAAGATAAATTACAAAAACA
AAGCAGTAGTGTTGTAAACGAAGAGGTTACACCCCAAGAAAACAGTGAGCAGGCTTACAAAGTAGAACTATCATCTATAG
CTAAAAATATAAATTCAAACTCCGACGAAAATATAAAAGATATGTCAAAGAAGATTGAAGAGATAAAAGCCAAAATTGCT
AATGGTTCTTATGAGATAGATACCAACAAAATAGTAGAAGGTTTGTTAAAATACTTTTAG

Upstream 100 bases:

>100_bases
TCTTGGGAGCCAGAGCTTTGTTTTATATTCATAAAAGCCTTGCAAACAATTTATATTAAAATATCTTAAATATATTCCGA
TATTTATATAGAGGTGTTAT

Downstream 100 bases:

>100_bases
TTAATATCCCAAGGGCGATTAGCTCAGTTGGGAGAGCGCCATCCTCACACGGTGGAGGTCGCAGGTTCGAGCCCTGTATC
GCCCATTATTGGGAATCATT

Product: anti-sigma-28 factor FlgM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIA
NGSYEIDTNKIVEGLLKYF

Sequences:

>Translated_99_residues
MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIA
NGSYEIDTNKIVEGLLKYF
>Mature_98_residues
SRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSNSDENIKDMSKKIEEIKAKIAN
GSYEIDTNKIVEGLLKYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11053; Mature: 10922

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
SDENIKDMSKKIEEIKAKIANGSYEIDTNKIVEGLLKYF
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
SRIEGDITRNAGLDTSIAKKDKLQKQSSSVVNEEVTPQENSEQAYKVELSSIAKNINSN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
SDENIKDMSKKIEEIKAKIANGSYEIDTNKIVEGLLKYF
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA