| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is murC
Identifier: 195952962
GI number: 195952962
Start: 523551
End: 524900
Strand: Direct
Name: murC
Synonym: HY04AAS1_0587
Alternate gene names: 195952962
Gene position: 523551-524900 (Clockwise)
Preceding gene: 195952956
Following gene: 195952963
Centisome position: 33.57
GC content: 34.52
Gene sequence:
>1350_bases ATGTTTAGAGAAAAATTTAGAAAGTTTCATTTTATAGGTATTGGTGGTATAGGTATGAGCGGTATCGCTAAGATACTGCT TGATATGGGTTATGAGGTATCTGGCTCTGATGTTAGACAAAACGATGTTATAAAGGAACTAAAAGAAAAAGGAGCCACCA TCTATATAGGACATGATGCTAAAAATGTGATAGGCAAAGAAGTAGTAGTGTATTCGTCTGCTATATCAAATGTAAACGAA GAGCTTTTAAAAGCCAAAGAGCTTGGTCTTCAAGTGATATCAAGAGGGGATATGTTGGCAGATTTGTTTAGGATGAAAGA GGGTATAGCCATATCAGGCTCTCACGGCAAAACTACCACCACATCTATGATTTCTCATATATCACATATAGCTGGACTAG ATCCTACTGTTTTAATAGGTGGTATCTTACAGACCTTTGGTTCAAACGCAGTGCTTGGAAAAAGCGAGCTTTTGATATCT GAAGCCGATGAGTCTGATGGATCTTTTTTAAAACTAAACTCTGTTATAAACGTAGTTACAAATATAGACAAAGAGCATAT TGGATACTACAAAGATTATGAAGATATAAAAGAAGCCTTTGTAAAGTTTATAAACAACGTACCTTTTTACGGAGCATCGG TGGTAAATATAGACGATACCGGTGTTAGGTCTATATTATCAAAAATACATAAAAAGATAATCACTTACGGGATAGAATCT GGGGATTTTCAAGCTAAAAATATAGTTTTTAACAGCGACAACACCCGTTTTGATGTATTTTACAAAGGTATAAAACTAAA CACAATAGAGCTTCAAATCCCAGGTATCCACAACGTTTACAACGCACTTGCTTCAATAGCCGTTTCAACACTTATGGAAA TAGAACAACCTGTTATAAGAGACGCTCTTAAAAGCTTTAAAAACGCCAAAAGAAGGATCGAATTTGTCGGTGAAAAAAAC ACAAACCTCATCTACGATGATTACGGACATCATCCAACGGAGATAAAAAGCGTTTACGAAGCCCTAAAATCAAAATATAA AGACAAAAATATAGTAGTGGTGTTCCAACCTCATAGATATTCAAGAACTTACTATCTTATAGATGATTTTGTAGATCTTT TTAAAAGCTTAGATAAGGTATTCTTACTTGATATATATGGGGCTTCTGAGGAAAATACGTTTGGTATTTCTTCTTTAGAT ATGATAAACAAAGTATCAAAAGAAGAGTGTGTTTATATACCATCAAAAGAAGAGCTTTTTGATAGACTTGATGAGCTAAA AGATAGCGTTATTGTGTTTATGGGGGCTGGTTCTATAGGCCAATGGTCTCATGAATATGCAAAGACGTAA
Upstream 100 bases:
>100_bases ATAACAAAACATCTAAATGCTTTCTATGATAGGTATCATTATATATAAAAAATTTTTTATACAAAATTGTTTATTTTGTG TTGGTGCTATAATATAACAA
Downstream 100 bases:
>100_bases AATATCTTTTGTAATTCTTACAAAAAACGAAGAAAAAAACATAAAAAGAGCCATAGATAGCATAAAAGATGTAGCAGATG AGATACTTGTAATAGATTCA
Product: UDP-N-acetylmuramate/alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MFREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDAKNVIGKEVVVYSSAISNVNE ELLKAKELGLQVISRGDMLADLFRMKEGIAISGSHGKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVLGKSELLIS EADESDGSFLKLNSVINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHKKIITYGIES GDFQAKNIVFNSDNTRFDVFYKGIKLNTIELQIPGIHNVYNALASIAVSTLMEIEQPVIRDALKSFKNAKRRIEFVGEKN TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDKVFLLDIYGASEENTFGISSLD MINKVSKEECVYIPSKEELFDRLDELKDSVIVFMGAGSIGQWSHEYAKT
Sequences:
>Translated_449_residues MFREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDAKNVIGKEVVVYSSAISNVNE ELLKAKELGLQVISRGDMLADLFRMKEGIAISGSHGKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVLGKSELLIS EADESDGSFLKLNSVINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHKKIITYGIES GDFQAKNIVFNSDNTRFDVFYKGIKLNTIELQIPGIHNVYNALASIAVSTLMEIEQPVIRDALKSFKNAKRRIEFVGEKN TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDKVFLLDIYGASEENTFGISSLD MINKVSKEECVYIPSKEELFDRLDELKDSVIVFMGAGSIGQWSHEYAKT >Mature_449_residues MFREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDAKNVIGKEVVVYSSAISNVNE ELLKAKELGLQVISRGDMLADLFRMKEGIAISGSHGKTTTTSMISHISHIAGLDPTVLIGGILQTFGSNAVLGKSELLIS EADESDGSFLKLNSVINVVTNIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHKKIITYGIES GDFQAKNIVFNSDNTRFDVFYKGIKLNTIELQIPGIHNVYNALASIAVSTLMEIEQPVIRDALKSFKNAKRRIEFVGEKN TNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRYSRTYYLIDDFVDLFKSLDKVFLLDIYGASEENTFGISSLD MINKVSKEECVYIPSKEELFDRLDELKDSVIVFMGAGSIGQWSHEYAKT
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=460, Percent_Identity=39.3478260869565, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI1790680, Length=388, Percent_Identity=29.1237113402062, Blast_Score=165, Evalue=6e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_HYDS0 (B4U813)
Other databases:
- EMBL: CP001130 - RefSeq: YP_002121252.1 - ProteinModelPortal: B4U813 - SMR: B4U813 - GeneID: 6743383 - GenomeReviews: CP001130_GR - KEGG: hya:HY04AAS1_0587 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: CLSK2299677 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 50276; Mature: 50276
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDA CCHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCH KNVIGKEVVVYSSAISNVNEELLKAKELGLQVISRGDMLADLFRMKEGIAISGSHGKTTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHH TSMISHISHIAGLDPTVLIGGILQTFGSNAVLGKSELLISEADESDGSFLKLNSVINVVT HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCHHEEEEECCCCCCCEEEHHHHHHHHH NIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHKKIITYGIES CCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC GDFQAKNIVFNSDNTRFDVFYKGIKLNTIELQIPGIHNVYNALASIAVSTLMEIEQPVIR CCCEECEEEECCCCCEEEEEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH DALKSFKNAKRRIEFVGEKNTNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRY HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC SRTYYLIDDFVDLFKSLDKVFLLDIYGASEENTFGISSLDMINKVSKEECVYIPSKEELF CCEEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHH DRLDELKDSVIVFMGAGSIGQWSHEYAKT HHHHHHCCCEEEEEECCCCCCCCHHHCCC >Mature Secondary Structure MFREKFRKFHFIGIGGIGMSGIAKILLDMGYEVSGSDVRQNDVIKELKEKGATIYIGHDA CCHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCH KNVIGKEVVVYSSAISNVNEELLKAKELGLQVISRGDMLADLFRMKEGIAISGSHGKTTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCCCHHH TSMISHISHIAGLDPTVLIGGILQTFGSNAVLGKSELLISEADESDGSFLKLNSVINVVT HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCHHEEEEECCCCCCCEEEHHHHHHHHH NIDKEHIGYYKDYEDIKEAFVKFINNVPFYGASVVNIDDTGVRSILSKIHKKIITYGIES CCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC GDFQAKNIVFNSDNTRFDVFYKGIKLNTIELQIPGIHNVYNALASIAVSTLMEIEQPVIR CCCEECEEEECCCCCEEEEEEECEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH DALKSFKNAKRRIEFVGEKNTNLIYDDYGHHPTEIKSVYEALKSKYKDKNIVVVFQPHRY HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC SRTYYLIDDFVDLFKSLDKVFLLDIYGASEENTFGISSLDMINKVSKEECVYIPSKEELF CCEEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHH DRLDELKDSVIVFMGAGSIGQWSHEYAKT HHHHHHCCCEEEEEECCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA