Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952956

Identifier: 195952956

GI number: 195952956

Start: 519157

End: 519528

Strand: Direct

Name: 195952956

Synonym: HY04AAS1_0581

Alternate gene names: NA

Gene position: 519157-519528 (Clockwise)

Preceding gene: 195952955

Following gene: 195952962

Centisome position: 33.29

GC content: 33.33

Gene sequence:

>372_bases
ATGAAATGGTTTTGTCCTTATTGCTGGGCTGAACTAAAAGGGGATGAAAGGATATGTCCCAATTGCGGGAAAGATATCTA
TCATTTTACATCTCTTGATTTTGATGAAAAACTCTTATACGGCCTTGATAACCCAATACCAGAGAATAGAATGCTTGTAA
TAGAAGTAATAGAAAAAAGAAAAAATCAAAAAGCTGTTCCTAAGCTTTGTAGTATGCTATCAGAAGAAAAAGACACCTAC
GAGCTAATGGCTATCGTCAAAGCCCTTTTGTCTATATCAACCAAAGAAGCTATAGATTGTCTTAAGCATCATAACTTTGA
TAAAAACGCCATACTAAGAAAGTTTTTAGAAGATCATCTTAATAAATACTAG

Upstream 100 bases:

>100_bases
TGAATACCCTGTTATAAAAAGACAATTCCTTAGCCCTATAACTATTAATAAATTAAGCTATGATTATTCATATTGAACCT
ATGAATAAAGGAATAGAGCA

Downstream 100 bases:

>100_bases
AGTTTTATAACCTCCAAAGAGTTACCAACGTCTTTATTTCTTTTAGAAGGTCCTCTGAGAAGCACTGCGTAAGTGTTTTG
TAGGCTTTTATAAAGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKWFCPYCWAELKGDERICPNCGKDIYHFTSLDFDEKLLYGLDNPIPENRMLVIEVIEKRKNQKAVPKLCSMLSEEKDTY
ELMAIVKALLSISTKEAIDCLKHHNFDKNAILRKFLEDHLNKY

Sequences:

>Translated_123_residues
MKWFCPYCWAELKGDERICPNCGKDIYHFTSLDFDEKLLYGLDNPIPENRMLVIEVIEKRKNQKAVPKLCSMLSEEKDTY
ELMAIVKALLSISTKEAIDCLKHHNFDKNAILRKFLEDHLNKY
>Mature_123_residues
MKWFCPYCWAELKGDERICPNCGKDIYHFTSLDFDEKLLYGLDNPIPENRMLVIEVIEKRKNQKAVPKLCSMLSEEKDTY
ELMAIVKALLSISTKEAIDCLKHHNFDKNAILRKFLEDHLNKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14499; Mature: 14499

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFCPYCWAELKGDERICPNCGKDIYHFTSLDFDEKLLYGLDNPIPENRMLVIEVIEKR
CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
KNQKAVPKLCSMLSEEKDTYELMAIVKALLSISTKEAIDCLKHHNFDKNAILRKFLEDHL
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
NKY
CCC
>Mature Secondary Structure
MKWFCPYCWAELKGDERICPNCGKDIYHFTSLDFDEKLLYGLDNPIPENRMLVIEVIEKR
CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
KNQKAVPKLCSMLSEEKDTYELMAIVKALLSISTKEAIDCLKHHNFDKNAILRKFLEDHL
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
NKY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA