Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952755

Identifier: 195952755

GI number: 195952755

Start: 332255

End: 332695

Strand: Direct

Name: 195952755

Synonym: HY04AAS1_0377

Alternate gene names: NA

Gene position: 332255-332695 (Clockwise)

Preceding gene: 195952754

Following gene: 195952756

Centisome position: 21.31

GC content: 25.85

Gene sequence:

>441_bases
ATGATTGGTAAGCGTTTTATTGTTTGGTTTTTTGTGCTTTTTATATTGGAATTCTTCTTTTTAGAAGGAAATGGCTTGTA
TCCATTTCCAGAAGCATTTTTATCTTTGATATTCTTAAATTTAGAAAATGGGTATATTCCGCTTTGGTCATTTTTAATGG
GTATTTTAATGGATCTTAGCGTAAATACGTTGGGAGTTTTTACCTTTAGTTATACGTTTTATAGTGTAATAATAAGACTT
TTGCTTAGCTATACTTTAGAAACCGGTTTTTTAAAATTACCCATGTTTTTTATTTTTGATCTACTTGTAAAGCTAACAAA
CGTTGGTATTGTTTATATGAAGTACCATTATATTGATTTTGGATTTTTAAGTTTTTTCATGTCAATTTTTATAGATTGTA
TAATATTTTTTGTGTTAGATAGGTTTTATAAAAATGTATGA

Upstream 100 bases:

>100_bases
TTTTAGAGGTTAGTAGATCAAAAAATTTATTTTTTTTAAACGTCAAATTAAAACCTATGGCCAATCCTAACATATACGAT
TTTGTGGTGGTAATTAATAG

Downstream 100 bases:

>100_bases
AGAAAAATTACATTGTTTTTGCGCTTTTAATATTATTAGCTTATATTGCAATAGGTGCTAGATTATTTTATTTACAGATA
ATAAAAGGAGATAAGTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL
LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV

Sequences:

>Translated_146_residues
MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL
LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV
>Mature_146_residues
MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLSVNTLGVFTFSYTFYSVIIRL
LLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDFGFLSFFMSIFIDCIIFFVLDRFYKNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17409; Mature: 17409

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VNTLGVFTFSYTFYSVIIRLLLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
GFLSFFMSIFIDCIIFFVLDRFYKNV
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGKRFIVWFFVLFILEFFFLEGNGLYPFPEAFLSLIFLNLENGYIPLWSFLMGILMDLS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VNTLGVFTFSYTFYSVIIRLLLSYTLETGFLKLPMFFIFDLLVKLTNVGIVYMKYHYIDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHH
GFLSFFMSIFIDCIIFFVLDRFYKNV
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA