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The map label for this gene is fliM [H]

Identifier: 195952553

GI number: 195952553

Start: 156052

End: 157017

Strand: Direct

Name: fliM [H]

Synonym: HY04AAS1_0173

Alternate gene names: 195952553

Gene position: 156052-157017 (Clockwise)

Preceding gene: 195952552

Following gene: 195952554

Centisome position: 10.01

GC content: 31.78

Gene sequence:

>966_bases
ATGGCTGAACAAGTATTAGGTCAGGAAGAGGTAGACCTTCTTTTAAAGTCTTTAGGCAAAGAAGAAGAGGTAGAGGAAAA
ATCTTTAGAATACGAGAAGTTTGATATAGATGATTTAGAGCGTATTTCTCTAGGCACAATAGCAGGACTTGAGATTATAT
TAGAAAAGTGGAGCAGGCTTTCAAGGGTAAAGTTATCTAGCTTAATAGTGGCTATTAATAACATTTACAAAGCTGAAACA
TCTCTCATAAGATTTGAGGATTTAATAACTAAATTACCAGTTCCATCGTGTATAAATATGTTTAATATTACTGGGTTAAA
AGGTACGCACTTTTTGATATTAGATCCTCGTATGATTTATAGCATAGTAAGTGTTATATTTGGTGGTTCTGCTAAACCTT
ATAGGATAGAAGGTAAGGAGTTTACAAAGTTAGAGTTAAAAATTATAAAGAAAGTGGTGGATTTACTTTTAAGCGCTTTT
CAAGAAAGTTGGAATAGTATATTGTCTGGAGAAGTTATGTATTTGGAAACGGAGGTAAACCCAGCCCTTATAGCTCCTAT
GAATTCTAAGAAGGAAATGTTTATACAAGCTCATATAAATATAGAAATAGATGGCATAGATTATCCTATTTTTCTTGCTA
TACAAAACTCTTCTTTAGAACCCGTTGTAGATAGATTAAGAAACGTATCAGAAGTATCAGATTATGTTGATTATGATAGT
ATAAATAAAAATTTAATAAAAAATTTAACGGTTAGTTTGTCTGTAGCGATAGATGGTGGTGATTTTATGGTAAAAGATAT
ACTAGAATGGGAAGTAGGTGATACTATAACACTCAAAACTTCTGCTAACAGGCCAGTAAAGGTAAATATAGAAGGGATGC
TTAAGATGTATGGTGTATTGGGGCGCTCTAATTCTAAAAAAGCTGTTAAAATACTAAAATTATTGGATAACAAGGAGAGT
CAATAA

Upstream 100 bases:

>100_bases
TGATAAGATGATAAAGGTAACTAAGGAAAATCCAGATAAGGTGGCAAAGATTATTAAGCATTGGCTTAGTAGCACCAAAA
AGACTTAGAGGTGAACAACT

Downstream 100 bases:

>100_bases
TGGCAGAGGAAGAAAAACAAGATCAACAACCTGAAGAGATCAAGGAAAAAGAAAACAAAGTAGAACCTACACCTCAAAAC
GATGAAGACTTGATGAAATT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAEQVLGQEEVDLLLKSLGKEEEVEEKSLEYEKFDIDDLERISLGTIAGLEIILEKWSRLSRVKLSSLIVAINNIYKAET
SLIRFEDLITKLPVPSCINMFNITGLKGTHFLILDPRMIYSIVSVIFGGSAKPYRIEGKEFTKLELKIIKKVVDLLLSAF
QESWNSILSGEVMYLETEVNPALIAPMNSKKEMFIQAHINIEIDGIDYPIFLAIQNSSLEPVVDRLRNVSEVSDYVDYDS
INKNLIKNLTVSLSVAIDGGDFMVKDILEWEVGDTITLKTSANRPVKVNIEGMLKMYGVLGRSNSKKAVKILKLLDNKES
Q

Sequences:

>Translated_321_residues
MAEQVLGQEEVDLLLKSLGKEEEVEEKSLEYEKFDIDDLERISLGTIAGLEIILEKWSRLSRVKLSSLIVAINNIYKAET
SLIRFEDLITKLPVPSCINMFNITGLKGTHFLILDPRMIYSIVSVIFGGSAKPYRIEGKEFTKLELKIIKKVVDLLLSAF
QESWNSILSGEVMYLETEVNPALIAPMNSKKEMFIQAHINIEIDGIDYPIFLAIQNSSLEPVVDRLRNVSEVSDYVDYDS
INKNLIKNLTVSLSVAIDGGDFMVKDILEWEVGDTITLKTSANRPVKVNIEGMLKMYGVLGRSNSKKAVKILKLLDNKES
Q
>Mature_320_residues
AEQVLGQEEVDLLLKSLGKEEEVEEKSLEYEKFDIDDLERISLGTIAGLEIILEKWSRLSRVKLSSLIVAINNIYKAETS
LIRFEDLITKLPVPSCINMFNITGLKGTHFLILDPRMIYSIVSVIFGGSAKPYRIEGKEFTKLELKIIKKVVDLLLSAFQ
ESWNSILSGEVMYLETEVNPALIAPMNSKKEMFIQAHINIEIDGIDYPIFLAIQNSSLEPVVDRLRNVSEVSDYVDYDSI
NKNLIKNLTVSLSVAIDGGDFMVKDILEWEVGDTITLKTSANRPVKVNIEGMLKMYGVLGRSNSKKAVKILKLLDNKESQ

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=326, Percent_Identity=23.6196319018405, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 36164; Mature: 36032

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQVLGQEEVDLLLKSLGKEEEVEEKSLEYEKFDIDDLERISLGTIAGLEIILEKWSRL
CCCHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRVKLSSLIVAINNIYKAETSLIRFEDLITKLPVPSCINMFNITGLKGTHFLILDPRMIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECHHHHH
SIVSVIFGGSAKPYRIEGKEFTKLELKIIKKVVDLLLSAFQESWNSILSGEVMYLETEVN
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PALIAPMNSKKEMFIQAHINIEIDGIDYPIFLAIQNSSLEPVVDRLRNVSEVSDYVDYDS
CEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHH
INKNLIKNLTVSLSVAIDGGDFMVKDILEWEVGDTITLKTSANRPVKVNIEGMLKMYGVL
CCHHHHHCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHH
GRSNSKKAVKILKLLDNKESQ
CCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEQVLGQEEVDLLLKSLGKEEEVEEKSLEYEKFDIDDLERISLGTIAGLEIILEKWSRL
CCHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRVKLSSLIVAINNIYKAETSLIRFEDLITKLPVPSCINMFNITGLKGTHFLILDPRMIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECHHHHH
SIVSVIFGGSAKPYRIEGKEFTKLELKIIKKVVDLLLSAFQESWNSILSGEVMYLETEVN
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PALIAPMNSKKEMFIQAHINIEIDGIDYPIFLAIQNSSLEPVVDRLRNVSEVSDYVDYDS
CEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHH
INKNLIKNLTVSLSVAIDGGDFMVKDILEWEVGDTITLKTSANRPVKVNIEGMLKMYGVL
CCHHHHHCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHH
GRSNSKKAVKILKLLDNKESQ
CCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]